Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002697

Experiment: RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM
3,038,926	-				+0.5
3,038,926	-				+0.1
3,038,926	-				+1.5
3,038,953	-				-0.5
3,039,018	-		ABIE53_002696	0.16	+1.7
3,039,069	+		ABIE53_002696	0.21	+1.5
3,039,069	+		ABIE53_002696	0.21	+0.5
3,039,070	-		ABIE53_002696	0.21	+0.8
3,039,070	-		ABIE53_002696	0.21	-0.1
3,039,070	-		ABIE53_002696	0.21	-0.5
3,039,117	-		ABIE53_002696	0.26	-1.6
3,039,136	+		ABIE53_002696	0.28	-0.6
3,039,137	-		ABIE53_002696	0.28	-0.1
3,039,137	-		ABIE53_002696	0.28	-0.3
3,039,137	-		ABIE53_002696	0.28	+0.7
3,039,137	-		ABIE53_002696	0.28	+0.1
3,039,137	-		ABIE53_002696	0.28	-0.6
3,039,298	+		ABIE53_002696	0.45	-0.9
3,039,298	+		ABIE53_002696	0.45	-0.8
3,039,392	+		ABIE53_002696	0.54	-0.8
3,039,460	+		ABIE53_002696	0.61	-0.5
3,039,674	+		ABIE53_002696	0.84	-1.4
3,039,675	-		ABIE53_002696	0.84	+0.5
3,039,757	+				-3.1
3,039,758	-				+0.1
3,039,758	-				+0.7
3,039,785	+				-0.2
3,039,788	+				+2.5
3,039,788	+				+1.2
3,039,872	-				-0.1
3,039,872	-				-1.3
3,040,073	-		ABIE53_002697	0.24	-2.2
3,040,073	-		ABIE53_002697	0.24	-1.0
3,040,073	-		ABIE53_002697	0.24	-1.4
3,040,073	-		ABIE53_002697	0.24	+0.2
3,040,177	+		ABIE53_002697	0.41	+0.2
3,040,177	+		ABIE53_002697	0.41	-0.2
3,040,178	-		ABIE53_002697	0.41	+1.0
3,040,222	+		ABIE53_002697	0.48	-0.1
3,040,223	-		ABIE53_002697	0.48	-1.1
3,040,271	+		ABIE53_002697	0.55	+2.2
3,040,271	+		ABIE53_002697	0.55	-0.6
3,040,271	+		ABIE53_002697	0.55	+1.5
3,040,271	+		ABIE53_002697	0.55	-1.6
3,040,271	+		ABIE53_002697	0.55	-0.3
3,040,271	+		ABIE53_002697	0.55	+2.5
3,040,272	-		ABIE53_002697	0.55	-1.8
3,040,272	-		ABIE53_002697	0.55	+1.2
3,040,272	-		ABIE53_002697	0.55	+1.9
3,040,340	-		ABIE53_002697	0.66	-0.9
3,040,369	+		ABIE53_002697	0.70	-0.8
3,040,369	+		ABIE53_002697	0.70	-0.6
3,040,369	+		ABIE53_002697	0.70	+0.8
3,040,369	+		ABIE53_002697	0.70	-0.2
3,040,369	+		ABIE53_002697	0.70	-0.1
3,040,612	-				+0.3
3,040,645	-				+0.1
3,040,655	-				-1.3
3,040,826	+		ABIE53_002698	0.27	-2.0
3,040,826	+		ABIE53_002698	0.27	-1.2
3,040,849	+		ABIE53_002698	0.31	-2.7
3,040,849	+		ABIE53_002698	0.31	-0.1
3,040,850	-		ABIE53_002698	0.31	-1.7
3,040,924	+		ABIE53_002698	0.44	-0.8
3,040,925	-		ABIE53_002698	0.44	-1.7
3,041,110	-		ABIE53_002698	0.77	-0.5
3,041,142	+		ABIE53_002698	0.83	-2.9
3,041,142	+		ABIE53_002698	0.83	-1.1
3,041,213	-				-0.8
3,041,220	+				-0.8
3,041,293	-				-1.0
3,041,347	+				+0.1
3,041,351	+				-0.1
3,041,352	-				-1.5
3,041,451	-				-0.1