Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4570

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml
5,991,164	-		BT4569	0.21	+2.1
5,991,260	-		BT4569	0.30	+0.5
5,991,260	-		BT4569	0.30	-1.0
5,991,399	-		BT4569	0.42	-2.3
5,991,626	-		BT4569	0.63	-0.2
5,991,629	+		BT4569	0.64	+0.1
5,991,630	-		BT4569	0.64	-2.2
5,991,637	-		BT4569	0.64	+1.7
5,991,676	+		BT4569	0.68	-0.2
5,991,863	-		BT4569	0.85	-0.3
5,991,922	+				-1.5
5,991,923	-				-0.9
5,992,096	-		BT4570	0.16	-1.5
5,992,099	+		BT4570	0.16	-1.5
5,992,118	+		BT4570	0.21	-2.6
5,992,181	+		BT4570	0.37	-1.8
5,992,424	+				-0.5
5,992,468	+				-0.6
5,992,469	-				+1.5
5,992,472	+				-0.7
5,992,473	-				-1.4
5,992,531	+		BT4571	0.17	-0.1
5,992,612	+		BT4571	0.31	-2.5
5,992,613	-		BT4571	0.32	-1.2
5,992,613	-		BT4571	0.32	-1.0
5,992,664	-		BT4571	0.41	+0.3
5,992,773	+		BT4571	0.60	-2.0
5,993,014	+				-0.7
5,993,018	-				-1.1
5,993,019	+				-0.6
5,993,024	+				-1.0
5,993,029	-				-2.3
5,993,053	-				-0.8
5,993,130	-				-2.2
5,993,152	+				-0.1
5,993,199	-				-1.3
5,993,209	-				-0.3
5,993,322	+		BT4572	0.15	-0.1
5,993,325	-		BT4572	0.15	-0.1