Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3920

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml
5,093,576	+		BT3918	0.83	-2.3
5,093,616	+		BT3918	0.89	-5.1
5,093,662	+				-2.8
5,093,677	+				-1.8
5,093,711	+				-1.4
5,093,829	+		BT3919	0.19	-1.0
5,093,837	+		BT3919	0.20	-0.1
5,093,883	+		BT3919	0.26	-0.1
5,093,887	+		BT3919	0.27	-1.5
5,093,887	+		BT3919	0.27	-2.9
5,093,944	+		BT3919	0.35	-2.7
5,093,946	+		BT3919	0.35	-2.2
5,093,952	+		BT3919	0.36	-0.6
5,094,231	+		BT3919	0.74	+0.5
5,094,322	+		BT3919	0.87	-2.9
5,094,381	+				-1.0
5,094,757	+		BT3920	0.64	-3.6
5,094,757	+		BT3920	0.64	-1.6
5,094,874	+				-0.4
5,094,883	+				-2.7
5,095,556	+		BT3921	0.72	-1.2
5,095,585	+		BT3921	0.76	-1.1
5,095,587	+		BT3921	0.76	-0.8
5,095,620	+		BT3921	0.80	-0.5
5,095,620	+		BT3921	0.80	-3.1
5,095,777	+				+0.5
5,095,777	+				-1.1
5,095,798	+				+0.2