Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3727

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml
4,837,212	-				-2.8
4,837,214	-				+0.1
4,837,241	-				-1.0
4,837,315	-				-1.1
4,837,317	-				-0.4
4,837,317	-				-1.9
4,837,319	-				-1.6
4,837,336	-				-1.0
4,837,336	-				-0.0
4,837,346	-				-0.3
4,837,399	-		BT3727	0.11	-3.1
4,837,399	-		BT3727	0.11	+0.0
4,837,474	-		BT3727	0.16	-1.0
4,837,521	-		BT3727	0.19	+0.8
4,837,556	-		BT3727	0.21	-3.2
4,837,561	-		BT3727	0.22	+0.4
4,837,561	-		BT3727	0.22	-0.9
4,837,561	-		BT3727	0.22	-0.1
4,837,563	-		BT3727	0.22	+0.6
4,837,596	-		BT3727	0.24	-2.7
4,837,730	-		BT3727	0.33	+0.2
4,837,852	-		BT3727	0.41	-2.0
4,837,852	-		BT3727	0.41	-3.8
4,838,014	-		BT3727	0.52	-2.1
4,838,105	-		BT3727	0.58	-3.5
4,838,179	-		BT3727	0.63	-2.7
4,838,197	-		BT3727	0.65	-2.8
4,838,539	-		BT3727	0.88	-3.7
4,838,784	-				-0.1
4,838,806	+				+1.2
4,838,855	+				-1.1
4,838,860	+				-1.5