Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2417

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml
3,018,484	-		BT2417	0.20	-0.9
3,018,503	-		BT2417	0.21	-3.9
3,018,570	-		BT2417	0.24	-0.2
3,020,041	-				+1.7
3,020,041	-				-1.4
3,020,098	+				-0.2
3,020,194	-		BT2418	0.25	+1.1
3,020,196	+		BT2418	0.26	+1.1
3,020,200	+		BT2418	0.27	-1.1
3,020,201	-		BT2418	0.27	-0.9
3,020,201	-		BT2418	0.27	+0.1
3,020,220	-		BT2418	0.32	-1.9
3,020,221	+		BT2418	0.32	-2.8
3,020,221	+		BT2418	0.32	-1.7
3,020,221	+		BT2418	0.32	-1.9
3,020,349	+		BT2418	0.65	-0.4
3,020,357	+		BT2418	0.67	-0.9
3,020,358	-		BT2418	0.67	-1.7
3,020,371	-		BT2418	0.71	-0.9
3,020,412	-		BT2418	0.81	-0.5
3,020,415	-		BT2418	0.82	+0.1
3,020,415	-		BT2418	0.82	-3.9
3,020,435	+		BT2418	0.87	-0.1
3,020,455	+				-2.5
3,020,503	+				+0.1
3,020,544	+				+0.3
3,020,787	+				-3.0
3,020,793	+				-0.7
3,020,794	-				+0.6
3,020,838	+				-2.0
3,020,838	+				+0.1
3,020,838	+				+0.3
3,020,865	+				-1.7
3,020,866	-				-0.7
3,020,907	-				+1.7
3,020,929	+				-0.1
3,020,930	-				-0.1
3,020,930	-				-1.7
3,020,942	-				-1.2
3,020,944	-				-1.1
3,020,950	-				+0.3