Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1747

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml
2,155,158	+		BT1746	0.44	-4.1
2,155,430	+		BT1746	0.67	-3.0
2,155,605	-		BT1746	0.82	-2.4
2,155,834	-				-1.8
2,155,917	+				-2.7
2,155,918	-				-2.8
2,155,939	-				-3.9
2,155,966	-				-3.6
2,155,979	+				-2.2
2,156,004	+				-2.6
2,156,005	-				-2.7
2,156,111	-				-2.0
2,156,202	+				-1.4
2,156,249	+		BT1747	0.11	-1.2
2,156,249	+		BT1747	0.11	-0.3
2,156,385	+		BT1747	0.15	-2.8
2,156,589	-		BT1747	0.21	-5.5
2,156,679	+		BT1747	0.23	-2.0
2,156,773	+		BT1747	0.26	-2.9
2,156,847	+		BT1747	0.28	-2.6
2,156,881	+		BT1747	0.29	-2.4
2,156,882	-		BT1747	0.29	-1.8
2,157,045	-		BT1747	0.33	-2.3
2,157,054	+		BT1747	0.34	-2.4
2,157,106	-		BT1747	0.35	-2.3
2,157,145	-		BT1747	0.36	-2.0
2,157,300	-		BT1747	0.41	-2.4
2,157,349	+		BT1747	0.42	-2.0
2,157,356	+		BT1747	0.42	-2.6
2,157,423	+		BT1747	0.44	-1.7
2,157,482	-		BT1747	0.46	-3.0
2,157,482	-		BT1747	0.46	-1.7
2,157,573	-		BT1747	0.48	-1.2
2,157,689	-		BT1747	0.52	-2.6
2,157,818	+		BT1747	0.55	-0.9
2,157,947	-		BT1747	0.59	-1.0
2,158,009	-		BT1747	0.61	-2.9
2,158,617	+		BT1747	0.78	-2.6
2,158,681	-		BT1747	0.79	-2.5
2,158,726	+		BT1747	0.81	-1.6
2,158,734	+		BT1747	0.81	-1.3
2,158,774	+		BT1747	0.82	-2.8
2,158,881	+		BT1747	0.85	-2.8
2,158,882	-		BT1747	0.85	-1.7
2,158,963	-		BT1747	0.87	-2.9
2,158,965	+		BT1747	0.87	-3.5
2,158,970	-		BT1747	0.88	-1.4
2,158,976	-		BT1747	0.88	-2.0
2,158,979	+		BT1747	0.88	-2.0
2,159,089	-				-2.2
2,159,119	-				-3.7
2,159,346	+				-1.7
2,159,400	+				-0.9
2,159,410	+				+0.2
2,159,414	-				+0.2
2,159,435	-				-0.8
2,159,437	+				-0.4
2,159,487	+				-0.9
2,159,487	+				-0.8
2,159,488	-				+0.2
2,159,488	-				+0.3
2,159,488	-				+3.0
2,159,493	+				-2.3
2,159,515	+				+0.7
2,159,619	+		BT1748	0.43	-1.9
2,159,633	-		BT1748	0.51	-1.3
2,159,633	-		BT1748	0.51	+1.2
2,159,633	-		BT1748	0.51	-1.1
2,159,634	+		BT1748	0.51	-0.9
2,159,681	+		BT1748	0.76	-2.2
2,159,685	-		BT1748	0.78	-0.8
2,159,685	-		BT1748	0.78	-2.7
2,159,691	-		BT1748	0.81	+0.2
2,159,695	+		BT1748	0.84	+1.2
2,159,929	-		BT1749	0.23	+0.5
2,159,929	-		BT1749	0.23	-0.1
2,159,929	-		BT1749	0.23	+1.0
2,159,948	+		BT1749	0.25	-0.9
2,159,956	+		BT1749	0.26	-1.0
2,159,958	+		BT1749	0.27	+0.0
2,160,105	-		BT1749	0.44	-0.4
2,160,107	-		BT1749	0.44	-0.7
2,160,118	+		BT1749	0.46	-0.8
2,160,274	+		BT1749	0.65	+1.6
2,160,275	-		BT1749	0.65	-1.9
2,160,275	-		BT1749	0.65	-0.3
2,160,278	+		BT1749	0.65	+0.2
2,160,279	-		BT1749	0.65	-0.3
2,160,279	-		BT1749	0.65	-1.8
2,160,320	-		BT1749	0.70	-1.0
2,160,329	+		BT1749	0.71	+1.6
2,160,354	-		BT1749	0.74	-1.3
2,160,386	+		BT1749	0.78	-0.4
2,160,387	-		BT1749	0.78	-1.8
2,160,387	-		BT1749	0.78	-1.0
2,160,391	-		BT1749	0.79	-1.7