Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3222

Experiment: KB with Naringin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Naringin 250 ug/ml
3,858,585	+		Psyr_3221	0.12	+1.4
3,858,586	-		Psyr_3221	0.12	+0.3
3,858,606	-		Psyr_3221	0.14	-0.6
3,858,797	+		Psyr_3221	0.31	-1.0
3,858,874	+		Psyr_3221	0.38	-1.1
3,858,874	+		Psyr_3221	0.38	-1.8
3,859,213	-		Psyr_3221	0.68	+0.4
3,859,213	-		Psyr_3221	0.68	-0.8
3,859,233	+		Psyr_3221	0.70	+1.2
3,859,234	-		Psyr_3221	0.70	-0.1
3,859,281	+		Psyr_3221	0.74	+0.5
3,859,281	+		Psyr_3221	0.74	+1.4
3,859,282	-		Psyr_3221	0.74	+0.7
3,859,282	-		Psyr_3221	0.74	-1.2
3,859,282	-		Psyr_3221	0.74	+0.0
3,859,282	-		Psyr_3221	0.74	+0.9
3,859,284	+		Psyr_3221	0.74	+0.9
3,859,284	+		Psyr_3221	0.74	-0.6
3,859,372	-		Psyr_3221	0.82	+0.5
3,859,372	-		Psyr_3221	0.82	-1.1
3,859,395	+		Psyr_3221	0.84	+0.5
3,859,395	+		Psyr_3221	0.84	-1.2
3,859,396	-		Psyr_3221	0.84	+2.6
3,859,396	-		Psyr_3221	0.84	+0.3
3,859,464	+				-1.2
3,859,623	-				-0.7
3,859,637	+				-0.0
3,859,637	+				-1.6
3,859,637	+				-0.4
3,859,637	+				-1.8
3,859,637	+				+0.5
3,859,638	-				+0.2
3,859,638	-				+0.3
3,859,638	-				-1.6
3,859,638	-				-0.0
3,859,674	-				+0.1
3,859,674	-				-1.6
3,859,942	-		Psyr_3222	0.24	-0.2
3,860,015	+		Psyr_3222	0.29	+0.0
3,860,015	+		Psyr_3222	0.29	+0.3
3,860,016	-				+0.4
3,860,080	+		Psyr_3222	0.33	+1.8
3,860,369	+		Psyr_3222	0.52	-1.0
3,860,369	+		Psyr_3222	0.52	-3.3
3,860,522	-		Psyr_3222	0.62	-0.5
3,860,522	-		Psyr_3222	0.62	-1.1
3,860,522	-		Psyr_3222	0.62	+0.4
3,860,558	+		Psyr_3222	0.65	+0.9
3,860,559	-		Psyr_3222	0.65	+1.5
3,860,633	+		Psyr_3222	0.70	+0.9
3,860,634	-		Psyr_3222	0.70	+0.1
3,860,678	+		Psyr_3222	0.72	+0.9
3,860,678	+		Psyr_3222	0.72	+0.8
3,860,679	-		Psyr_3222	0.73	+2.1
3,860,687	+		Psyr_3222	0.73	-1.4
3,860,687	+		Psyr_3222	0.73	+1.1
3,860,688	-		Psyr_3222	0.73	+0.4
3,860,688	-		Psyr_3222	0.73	-0.7
3,860,688	-		Psyr_3222	0.73	+1.2
3,860,688	-		Psyr_3222	0.73	-0.5
3,860,693	+		Psyr_3222	0.73	+0.5
3,861,066	-				+1.2
3,861,080	-				-1.3
3,861,088	+				+0.7
3,861,159	+				-1.8
3,861,160	-				+1.1
3,861,171	-				+1.2
3,861,171	-				-1.7
3,861,296	+		Psyr_3223	0.21	-0.4
3,861,350	+		Psyr_3223	0.27	+0.8
3,861,491	+		Psyr_3223	0.42	+0.7
3,861,491	+		Psyr_3223	0.42	+1.8
3,861,492	-		Psyr_3223	0.42	+0.0
3,861,492	-		Psyr_3223	0.42	-1.1
3,861,503	+		Psyr_3223	0.43	+0.4
3,861,503	+		Psyr_3223	0.43	-0.5
3,861,503	+		Psyr_3223	0.43	+0.7
3,861,504	-		Psyr_3223	0.43	-0.4
3,861,539	+		Psyr_3223	0.47	-0.1
3,861,691	+		Psyr_3223	0.63	+0.9
3,861,691	+		Psyr_3223	0.63	+0.7
3,861,691	+		Psyr_3223	0.63	+0.2
3,861,691	+		Psyr_3223	0.63	-0.3
3,861,851	+		Psyr_3223	0.80	-1.2
3,861,851	+		Psyr_3223	0.80	+0.2
3,861,852	-		Psyr_3223	0.81	+1.3
3,861,852	-		Psyr_3223	0.81	-1.0
3,861,852	-		Psyr_3223	0.81	+2.1
3,861,852	-		Psyr_3223	0.81	+1.1
3,861,852	-		Psyr_3223	0.81	+0.6
3,861,852	-		Psyr_3223	0.81	+0.0
3,861,852	-		Psyr_3223	0.81	+0.4
3,861,852	-		Psyr_3223	0.81	-0.0
3,861,854	+		Psyr_3223	0.81	-0.2
3,861,855	-		Psyr_3223	0.81	-0.3
3,861,855	-		Psyr_3223	0.81	+0.4
3,861,881	+		Psyr_3223	0.84	+0.3
3,861,881	+		Psyr_3223	0.84	-0.3
3,861,887	+		Psyr_3223	0.84	-0.4
3,862,031	+				-0.1