Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3106

Experiment: KB with Naringin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Naringin 250 ug/ml
3,722,693	+		Psyr_3105	0.12	+0.2
3,722,693	+		Psyr_3105	0.12	+1.8
3,722,862	-		Psyr_3105	0.29	+0.4
3,722,913	-		Psyr_3105	0.34	-0.6
3,723,146	+		Psyr_3105	0.58	+1.1
3,723,146	+		Psyr_3105	0.58	+0.6
3,723,147	-		Psyr_3105	0.58	-0.4
3,723,147	-		Psyr_3105	0.58	+1.9
3,723,417	+		Psyr_3105	0.85	+1.4
3,723,417	+		Psyr_3105	0.85	-0.4
3,723,417	+		Psyr_3105	0.85	+1.0
3,723,417	+		Psyr_3105	0.85	-0.8
3,723,418	-		Psyr_3105	0.85	-0.7
3,723,418	-		Psyr_3105	0.85	+2.0
3,723,418	-		Psyr_3105	0.85	-0.7
3,723,548	+				+0.9
3,723,650	+				+0.0
3,723,650	+				-0.6
3,723,650	+				-0.2
3,723,651	-				+0.1
3,723,651	-				-0.1
3,723,651	-				+0.4
3,723,651	-				+0.2
3,723,651	-				-1.9
3,723,712	+				-0.3
3,723,713	-				+1.0
3,723,713	-				-0.2
3,723,713	-				-0.3
3,723,713	-				+0.8
3,723,713	-				+0.7
3,723,713	-				+0.1
3,723,713	-				-1.5
3,723,713	-				-1.8
3,723,713	-				+0.6
3,723,716	+				-0.2
3,723,716	+				+0.2
3,723,717	-				+0.2
3,723,717	-				+0.9
3,723,812	+		Psyr_3106	0.16	-1.3
3,723,813	-		Psyr_3106	0.16	-1.0
3,723,813	-		Psyr_3106	0.16	-0.3
3,723,813	-		Psyr_3106	0.16	+0.4
3,724,014	-		Psyr_3106	0.36	-1.0
3,724,052	+		Psyr_3106	0.40	+0.4
3,724,052	+		Psyr_3106	0.40	-0.3
3,724,053	-		Psyr_3106	0.40	-1.3
3,724,102	+		Psyr_3106	0.44	-0.8
3,724,157	+		Psyr_3106	0.50	-0.6
3,724,157	+		Psyr_3106	0.50	+0.2
3,724,158	-		Psyr_3106	0.50	-1.1
3,724,158	-		Psyr_3106	0.50	-0.7
3,724,158	-		Psyr_3106	0.50	-0.4
3,724,172	+		Psyr_3106	0.51	+0.4
3,724,172	+		Psyr_3106	0.51	-0.1
3,724,172	+		Psyr_3106	0.51	+1.2
3,724,173	-		Psyr_3106	0.51	-0.9
3,724,173	-		Psyr_3106	0.51	-1.4
3,724,173	-		Psyr_3106	0.51	-0.6
3,724,173	-		Psyr_3106	0.51	-1.2
3,724,173	-		Psyr_3106	0.51	+0.4
3,724,173	-		Psyr_3106	0.51	+0.2
3,724,503	-		Psyr_3106	0.84	-0.5
3,724,532	+		Psyr_3106	0.87	-0.8
3,724,588	+				-0.3
3,724,589	-				-1.3
3,724,589	-				-0.2
3,724,589	-				-0.2
3,724,589	-				+0.0
3,724,674	+				-1.2
3,724,675	-				+0.7
3,724,675	-				+0.1
3,724,708	+				+0.7
3,724,708	+				-2.7
3,724,708	+				+0.0
3,724,708	+				-0.6
3,724,709	-				-0.6
3,724,709	-				+0.7
3,724,751	+				+0.4
3,724,863	-				+0.0
3,724,863	-				+1.5
3,724,863	-				+1.2
3,724,924	-				-0.7
3,724,980	+				-1.8
3,724,987	-				+0.4
3,724,987	-				-0.7
3,725,082	-				-1.5
3,725,102	+				-1.2
3,725,103	-				+0.8
3,725,132	+				+2.4
3,725,132	+				+0.6
3,725,133	-				+0.8
3,725,161	+				-0.6
3,725,162	-				+1.7
3,725,166	+				-0.1
3,725,166	+				-0.4
3,725,181	-				-0.8
3,725,236	+		Psyr_3107	0.17	+1.6
3,725,236	+		Psyr_3107	0.17	-1.4
3,725,236	+		Psyr_3107	0.17	-2.5
3,725,237	-		Psyr_3107	0.18	-1.0
3,725,237	-		Psyr_3107	0.18	-2.5
3,725,237	-		Psyr_3107	0.18	+0.9
3,725,483	-				+1.1
3,725,524	-				+0.4
3,725,546	+				-0.6
3,725,547	-				-0.6
3,725,550	+				-0.4
3,725,576	+				-0.0
3,725,576	+				+0.3
3,725,577	-				+0.7
3,725,577	-				+0.2
3,725,577	-				-0.6
3,725,590	+				+1.0
3,725,591	-				+1.2
3,725,591	-				+0.9
3,725,591	-				-1.0