Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2400

Experiment: KB with Naringin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Naringin 250 ug/ml
2,781,289	+				-1.2
2,781,354	+				+0.1
2,781,354	+				-1.0
2,781,354	+				-0.9
2,781,354	+				-1.3
2,781,355	-				+2.1
2,781,355	-				+0.4
2,781,355	-				-0.7
2,781,355	-				-1.6
2,781,611	+		Psyr_2399	0.32	+0.0
2,781,611	+		Psyr_2399	0.32	-0.9
2,781,612	-		Psyr_2399	0.33	+0.0
2,781,612	-		Psyr_2399	0.33	-0.7
2,781,612	-		Psyr_2399	0.33	+0.2
2,781,612	-		Psyr_2399	0.33	-1.7
2,781,612	-		Psyr_2399	0.33	+0.5
2,781,785	+		Psyr_2399	0.54	-1.2
2,782,112	+				+0.7
2,782,112	+				-0.6
2,782,223	+				+0.9
2,782,223	+				-0.6
2,782,223	+				+0.6
2,782,223	+				+0.2
2,782,224	-				-0.6
2,782,224	-				-0.1
2,782,364	+		Psyr_2400	0.20	-1.0
2,782,364	+		Psyr_2400	0.20	-0.1
2,782,364	+		Psyr_2400	0.20	+1.6
2,782,364	+		Psyr_2400	0.20	-0.4
2,782,364	+		Psyr_2400	0.20	-0.2
2,782,364	+		Psyr_2400	0.20	+0.3
2,782,364	+		Psyr_2400	0.20	+2.0
2,782,364	+		Psyr_2400	0.20	+0.4
2,782,365	-		Psyr_2400	0.21	+0.5
2,782,365	-		Psyr_2400	0.21	-0.6
2,782,365	-		Psyr_2400	0.21	-0.1
2,782,365	-		Psyr_2400	0.21	-2.9
2,782,553	+		Psyr_2400	0.40	-0.8
2,782,553	+		Psyr_2400	0.40	+0.4
2,782,553	+		Psyr_2400	0.40	+0.0
2,782,553	+		Psyr_2400	0.40	+0.9
2,782,553	+		Psyr_2400	0.40	-0.3
2,782,553	+		Psyr_2400	0.40	-0.2
2,782,553	+		Psyr_2400	0.40	+1.5
2,782,553	+		Psyr_2400	0.40	-0.2
2,782,553	+		Psyr_2400	0.40	+1.0
2,782,554	-		Psyr_2400	0.40	+1.4
2,782,554	-		Psyr_2400	0.40	+1.1
2,782,554	-		Psyr_2400	0.40	+2.6
2,782,554	-		Psyr_2400	0.40	-1.0
2,782,554	-		Psyr_2400	0.40	+0.3
2,782,676	+		Psyr_2400	0.53	+1.2
2,782,827	+		Psyr_2400	0.69	+1.4
2,782,827	+		Psyr_2400	0.69	-0.6
2,782,828	-		Psyr_2400	0.69	+0.6
2,782,874	+		Psyr_2400	0.74	+0.8
2,782,874	+		Psyr_2400	0.74	+0.7
2,782,874	+		Psyr_2400	0.74	+2.4
2,782,875	-		Psyr_2400	0.74	-0.4
2,782,875	-		Psyr_2400	0.74	-2.5
2,782,875	-		Psyr_2400	0.74	+1.6
2,782,918	+		Psyr_2400	0.78	+0.7
2,783,110	+				-0.7
2,783,110	+				+0.1
2,783,110	+				-0.6
2,783,110	+				-0.2
2,783,111	-				-0.7
2,783,168	-				+0.4
2,783,217	-		Psyr_2401	0.11	+0.4
2,783,269	+		Psyr_2401	0.16	+1.1
2,783,269	+		Psyr_2401	0.16	+1.4
2,783,441	-		Psyr_2401	0.32	-0.6
2,783,650	+		Psyr_2401	0.53	-0.2
2,783,651	-		Psyr_2401	0.53	-0.8
2,783,726	+		Psyr_2401	0.60	-3.7
2,783,727	-		Psyr_2401	0.60	+0.4
2,783,737	+		Psyr_2401	0.61	-1.8
2,783,737	+		Psyr_2401	0.61	-0.7