Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1871

Experiment: KB with Naringin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Naringin 250 ug/ml
2,145,664	+				+0.4
2,145,664	+				+1.1
2,145,665	-				-0.1
2,145,665	-				-0.7
2,145,665	-				+0.4
2,145,669	-				-0.0
2,145,799	+		Psyr_1870	0.14	+0.4
2,145,800	-		Psyr_1870	0.15	+0.1
2,145,800	-		Psyr_1870	0.15	+0.4
2,145,837	+		Psyr_1870	0.18	+1.1
2,145,837	+		Psyr_1870	0.18	-0.4
2,145,837	+		Psyr_1870	0.18	+0.9
2,145,837	+		Psyr_1870	0.18	-0.8
2,145,838	-		Psyr_1870	0.19	-0.0
2,145,838	-		Psyr_1870	0.19	-0.3
2,145,838	-		Psyr_1870	0.19	-0.9
2,145,918	+		Psyr_1870	0.27	-3.0
2,145,918	+		Psyr_1870	0.27	+1.1
2,145,919	-		Psyr_1870	0.27	-0.6
2,145,919	-		Psyr_1870	0.27	+0.7
2,145,919	-		Psyr_1870	0.27	+0.3
2,146,111	-		Psyr_1870	0.47	+0.1
2,146,157	+				+0.9
2,146,158	-		Psyr_1870	0.52	+0.8
2,146,270	-		Psyr_1870	0.64	-2.2
2,146,272	+		Psyr_1870	0.64	-1.2
2,146,272	+		Psyr_1870	0.64	-0.8
2,146,318	-		Psyr_1870	0.69	+1.1
2,146,318	-		Psyr_1870	0.69	-0.4
2,146,318	-		Psyr_1870	0.69	+1.3
2,146,503	+		Psyr_1870	0.88	+0.4
2,146,504	-		Psyr_1870	0.88	+0.9
2,146,603	-				+1.0
2,146,646	+				-0.4
2,146,646	+				-0.5
2,146,647	-				-2.9
2,146,647	-				+2.0
2,146,652	+				-0.1
2,146,653	-				-0.3
2,146,653	-				-1.9
2,146,675	+				-0.2
2,146,683	-				+0.5
2,146,783	+		Psyr_1871	0.20	+0.8
2,146,783	+		Psyr_1871	0.20	+0.9
2,147,030	+		Psyr_1871	0.50	+2.0
2,147,030	+		Psyr_1871	0.50	-0.2
2,147,156	+		Psyr_1871	0.65	+0.6
2,147,157	-		Psyr_1871	0.65	+0.3
2,147,157	-		Psyr_1871	0.65	-0.4
2,147,226	+		Psyr_1871	0.73	+0.6
2,147,226	+		Psyr_1871	0.73	+0.6
2,147,309	+		Psyr_1871	0.83	-0.2
2,147,310	-		Psyr_1871	0.84	-0.0
2,147,444	+				+0.4
2,147,444	+				-2.8
2,147,444	+				+0.8
2,147,531	-				+1.0
2,147,554	+		Psyr_1872	0.14	+0.7
2,147,554	+		Psyr_1872	0.14	-0.2
2,147,555	-		Psyr_1872	0.14	+0.6
2,147,555	-		Psyr_1872	0.14	-0.3
2,147,555	-		Psyr_1872	0.14	+1.0
2,147,740	+		Psyr_1872	0.64	+0.5
2,147,754	-		Psyr_1872	0.68	+1.3
2,147,873	+				-1.2
2,147,873	+				+0.3
2,147,873	+				-1.1
2,147,873	+				+0.9
2,147,873	+				-1.7
2,147,874	-				+0.1
2,147,874	-				+1.0
2,147,874	-				+0.3
2,147,977	+				-1.8
2,147,988	+				-1.8
2,148,016	+				+1.3
2,148,016	+				-0.0
2,148,016	+				-0.3
2,148,017	-				-0.0
2,148,203	+				+0.4
2,148,203	+				+0.4
2,148,203	+				+0.9
2,148,203	+				+2.0
2,148,203	+				+0.6
2,148,204	-				+0.3
2,148,204	-				+0.1
2,148,204	-				-0.2
2,148,205	+				-1.2
2,148,206	-				-0.0
2,148,206	-				-1.2
2,148,211	+				+0.9
2,148,211	+				-0.8
2,148,211	+				+0.4
2,148,212	-				+0.3
2,148,212	-				-1.6
2,148,228	-				+0.2
2,148,228	-				-0.8
2,148,315	+				+2.2
2,148,373	-				+0.7
2,148,382	-				+0.4