Experiment: RCH2_defined_glucose with Iron (II) 0.635 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00835 and BWI76_RS00840 are separated by 254 nucleotides BWI76_RS00840 and BWI76_RS00845 are separated by 184 nucleotides
BWI76_RS00835: BWI76_RS00835 - phosphoenolpyruvate carboxylase, at 170,679 to 173,330
_RS00835
BWI76_RS00840: BWI76_RS00840 - acetylornithine deacetylase, at 173,585 to 174,736
_RS00840
BWI76_RS00845: BWI76_RS00845 - N-acetyl-gamma-glutamyl-phosphate reductase, at 174,921 to 175,925
_RS00845
Position (kb) 173
174
175 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 172.641 kb on + strand, within BWI76_RS00835 at 172.692 kb on - strand, within BWI76_RS00835 at 172.853 kb on + strand, within BWI76_RS00835 at 172.853 kb on + strand, within BWI76_RS00835 at 172.861 kb on - strand, within BWI76_RS00835 at 172.861 kb on - strand, within BWI76_RS00835 at 172.928 kb on + strand, within BWI76_RS00835 at 173.110 kb on - strand at 173.127 kb on - strand at 173.311 kb on + strand at 173.334 kb on + strand at 173.342 kb on - strand at 173.539 kb on + strand at 173.619 kb on - strand at 173.698 kb on - strand at 173.737 kb on + strand, within BWI76_RS00840 at 173.863 kb on + strand, within BWI76_RS00840 at 173.960 kb on - strand, within BWI76_RS00840 at 173.960 kb on - strand, within BWI76_RS00840 at 174.257 kb on + strand, within BWI76_RS00840 at 174.352 kb on + strand, within BWI76_RS00840 at 174.432 kb on - strand, within BWI76_RS00840 at 174.432 kb on - strand, within BWI76_RS00840 at 174.445 kb on + strand, within BWI76_RS00840 at 174.445 kb on + strand, within BWI76_RS00840 at 174.453 kb on - strand, within BWI76_RS00840 at 174.497 kb on - strand, within BWI76_RS00840 at 174.674 kb on + strand at 174.707 kb on - strand at 174.966 kb on + strand at 174.996 kb on + strand at 175.207 kb on + strand, within BWI76_RS00845 at 175.291 kb on + strand, within BWI76_RS00845 at 175.291 kb on + strand, within BWI76_RS00845 at 175.329 kb on - strand, within BWI76_RS00845 at 175.483 kb on - strand, within BWI76_RS00845 at 175.498 kb on - strand, within BWI76_RS00845 at 175.593 kb on + strand, within BWI76_RS00845 at 175.709 kb on - strand, within BWI76_RS00845 at 175.714 kb on - strand, within BWI76_RS00845
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with Iron (II) 0.635 mg/mL remove 172,641 + BWI76_RS00835 0.74 -1.1 172,692 - BWI76_RS00835 0.76 -2.2 172,853 + BWI76_RS00835 0.82 -3.2 172,853 + BWI76_RS00835 0.82 -3.1 172,861 - BWI76_RS00835 0.82 -3.4 172,861 - BWI76_RS00835 0.82 -1.3 172,928 + BWI76_RS00835 0.85 -2.9 173,110 - -5.2 173,127 - -3.3 173,311 + -2.0 173,334 + -2.3 173,342 - +0.2 173,539 + +0.1 173,619 - +0.2 173,698 - +0.7 173,737 + BWI76_RS00840 0.13 -1.9 173,863 + BWI76_RS00840 0.24 -0.4 173,960 - BWI76_RS00840 0.33 -1.0 173,960 - BWI76_RS00840 0.33 -0.5 174,257 + BWI76_RS00840 0.58 -0.6 174,352 + BWI76_RS00840 0.67 -0.9 174,432 - BWI76_RS00840 0.74 -0.1 174,432 - BWI76_RS00840 0.74 -0.8 174,445 + BWI76_RS00840 0.75 -0.8 174,445 + BWI76_RS00840 0.75 -0.8 174,453 - BWI76_RS00840 0.75 -0.5 174,497 - BWI76_RS00840 0.79 -1.1 174,674 + -0.7 174,707 - -0.3 174,966 + -2.9 174,996 + -1.9 175,207 + BWI76_RS00845 0.28 -4.1 175,291 + BWI76_RS00845 0.37 -3.0 175,291 + BWI76_RS00845 0.37 -0.9 175,329 - BWI76_RS00845 0.41 -2.3 175,483 - BWI76_RS00845 0.56 -3.0 175,498 - BWI76_RS00845 0.57 -0.5 175,593 + BWI76_RS00845 0.67 -2.9 175,709 - BWI76_RS00845 0.78 -3.8 175,714 - BWI76_RS00845 0.79 -2.3
Or see this region's nucleotide sequence