Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005488

Experiment: RCH2_defined_glucose_5mM with Dimethyl Sulfoxide 1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Dimethyl Sulfoxide 1 vol%
1,764,249	+				+0.2
1,764,249	+				+1.1
1,764,250	-				-0.8
1,764,270	+				+0.2
1,764,271	-				-1.5
1,764,487	-		ABIE53_005487	0.29	+2.0
1,764,706	-		ABIE53_005487	0.50	-1.5
1,764,826	-		ABIE53_005487	0.62	+1.5
1,765,054	+		ABIE53_005487	0.85	-0.7
1,765,330	+				-0.8
1,765,331	-				-1.6
1,765,450	+		ABIE53_005488	0.14	+1.5
1,765,450	+		ABIE53_005488	0.14	-0.5
1,765,450	+		ABIE53_005488	0.14	-2.1
1,765,450	+		ABIE53_005488	0.14	-0.1
1,765,451	-		ABIE53_005488	0.14	-0.5
1,765,451	-		ABIE53_005488	0.14	+1.2
1,765,594	+		ABIE53_005488	0.23	+0.4
1,765,714	+		ABIE53_005488	0.30	+1.7
1,765,825	+		ABIE53_005488	0.36	+0.7
1,765,825	+		ABIE53_005488	0.36	-2.4
1,765,825	+		ABIE53_005488	0.36	-0.0
1,765,825	+		ABIE53_005488	0.36	+0.0
1,765,826	-		ABIE53_005488	0.36	-0.5
1,765,826	-		ABIE53_005488	0.36	-0.5
1,765,826	-		ABIE53_005488	0.36	+0.5
1,765,826	-		ABIE53_005488	0.36	+0.0
1,765,826	-		ABIE53_005488	0.36	-1.6
1,765,826	-		ABIE53_005488	0.36	+0.5
1,766,064	+		ABIE53_005488	0.50	-0.9
1,766,065	-		ABIE53_005488	0.50	+0.5
1,766,065	-		ABIE53_005488	0.50	-0.8
1,766,065	-		ABIE53_005488	0.50	-0.5
1,766,065	-		ABIE53_005488	0.50	-0.5
1,766,071	+		ABIE53_005488	0.51	-0.2
1,766,071	+		ABIE53_005488	0.51	-0.5
1,766,072	-		ABIE53_005488	0.51	-1.5
1,766,072	-		ABIE53_005488	0.51	+0.2
1,766,072	-		ABIE53_005488	0.51	-0.5
1,766,072	-		ABIE53_005488	0.51	-0.0
1,766,072	-		ABIE53_005488	0.51	+0.1
1,766,072	-		ABIE53_005488	0.51	-0.8
1,766,075	+		ABIE53_005488	0.51	+0.5
1,766,075	+		ABIE53_005488	0.51	-0.5
1,766,075	+		ABIE53_005488	0.51	-0.0
1,766,075	+		ABIE53_005488	0.51	-0.5
1,766,076	-		ABIE53_005488	0.51	+0.5
1,766,076	-		ABIE53_005488	0.51	+0.4
1,766,076	-		ABIE53_005488	0.51	+0.2
1,766,076	-		ABIE53_005488	0.51	-0.5
1,766,076	-		ABIE53_005488	0.51	+1.3
1,766,087	+		ABIE53_005488	0.52	-0.3
1,766,258	-		ABIE53_005488	0.62	+0.1
1,766,258	-		ABIE53_005488	0.62	+1.5
1,766,377	+		ABIE53_005488	0.69	-0.4
1,766,452	+		ABIE53_005488	0.73	+1.5
1,766,452	+		ABIE53_005488	0.73	-1.7
1,766,452	+		ABIE53_005488	0.73	+0.1
1,766,453	-		ABIE53_005488	0.73	-0.3
1,766,453	-		ABIE53_005488	0.73	+0.3
1,766,453	-		ABIE53_005488	0.73	+1.3
1,766,545	+		ABIE53_005488	0.78	+0.2
1,766,561	-		ABIE53_005488	0.79	+1.9
1,766,650	+		ABIE53_005488	0.84	-0.9
1,766,651	-		ABIE53_005488	0.85	-0.0
1,766,651	-		ABIE53_005488	0.85	+1.9
1,766,651	-		ABIE53_005488	0.85	-0.6
1,767,279	+		ABIE53_005489	0.25	+0.8
1,767,280	-		ABIE53_005489	0.25	+0.5
1,767,293	-		ABIE53_005489	0.26	+2.1
1,767,501	+		ABIE53_005489	0.41	+1.0
1,767,501	+		ABIE53_005489	0.41	-0.2
1,767,502	-		ABIE53_005489	0.41	+1.2
1,767,502	-		ABIE53_005489	0.41	+0.5
1,767,516	+		ABIE53_005489	0.42	-0.6
1,767,516	+		ABIE53_005489	0.42	+0.1
1,767,543	-		ABIE53_005489	0.44	-0.9
1,767,747	-		ABIE53_005489	0.58	-0.6
1,767,747	-		ABIE53_005489	0.58	-2.0
1,767,747	-		ABIE53_005489	0.58	+1.5