Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4571

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml
5,991,626	-		BT4569	0.63	-1.8
5,991,629	+		BT4569	0.64	+0.5
5,991,630	-		BT4569	0.64	-1.9
5,991,637	-		BT4569	0.64	+1.1
5,991,676	+		BT4569	0.68	-1.6
5,991,863	-		BT4569	0.85	-0.6
5,991,922	+				-1.1
5,991,923	-				-2.2
5,992,096	-		BT4570	0.16	-1.8
5,992,099	+		BT4570	0.16	-2.8
5,992,118	+		BT4570	0.21	-0.6
5,992,181	+		BT4570	0.37	+0.2
5,992,424	+				-1.1
5,992,468	+				+0.5
5,992,469	-				+0.9
5,992,472	+				-0.6
5,992,473	-				-0.7
5,992,531	+		BT4571	0.17	-1.3
5,992,612	+		BT4571	0.31	-2.1
5,992,613	-		BT4571	0.32	-0.8
5,992,613	-		BT4571	0.32	-2.7
5,992,664	-		BT4571	0.41	-1.7
5,992,773	+		BT4571	0.60	-1.7
5,993,014	+				-0.7
5,993,018	-				-0.0
5,993,019	+				-1.0
5,993,024	+				-0.1
5,993,029	-				-2.0
5,993,053	-				-0.7
5,993,130	-				+0.6
5,993,152	+				+0.8
5,993,199	-				-0.8
5,993,209	-				-3.1
5,993,322	+		BT4572	0.15	+1.3
5,993,325	-		BT4572	0.15	-0.7
5,993,467	+		BT4572	0.26	-2.3
5,993,643	+		BT4572	0.40	+2.2
5,993,644	-		BT4572	0.40	-3.0
5,993,644	-		BT4572	0.40	-2.2
5,993,645	+		BT4572	0.40	+0.6
5,993,645	+		BT4572	0.40	+1.2
5,993,652	-		BT4572	0.41	-0.3
5,993,652	-		BT4572	0.41	+1.3
5,993,656	-		BT4572	0.41	-2.2
5,993,857	+		BT4572	0.57	-1.8
5,993,967	+		BT4572	0.65	-0.5
5,993,993	+		BT4572	0.68	-1.9
5,993,994	-		BT4572	0.68	-2.0