Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3285

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml
4,201,700	-		BT3284	0.88	+1.0
4,201,750	-				+0.7
4,201,859	-				-0.3
4,201,861	-				+1.9
4,201,861	-				-1.5
4,201,861	-				+1.0
4,201,861	-				+0.5
4,201,920	+				+0.4
4,201,967	+				-0.0
4,202,008	+				-1.3
4,202,032	-				-1.6
4,202,041	-				+0.1
4,202,041	-				+0.8
4,202,079	+				-2.9
4,202,085	+				-1.1
4,202,086	-				-1.7
4,202,109	+				+0.1
4,202,110	-				-0.0
4,202,110	-				+1.3
4,202,111	+				-2.2
4,202,345	-				+0.5
4,203,487	+				-0.5
4,203,487	+				+0.2
4,203,607	+				-0.6
4,203,612	+				-0.7
4,203,612	+				+0.3
4,203,618	+				-1.8
4,203,642	+				-2.3
4,203,672	+		BT3286	0.10	-0.2
4,203,867	+		BT3286	0.36	-2.0
4,203,997	+		BT3286	0.53	-1.9
4,204,001	+		BT3286	0.53	+0.7
4,204,037	+		BT3286	0.58	-1.1
4,204,039	+		BT3286	0.58	-1.3
4,204,268	+		BT3286	0.88	-2.0