Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2937

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml
3,693,533	+		BT2936	0.25	+0.9
3,693,534	-		BT2936	0.25	-1.3
3,693,536	+		BT2936	0.25	+1.3
3,693,604	+		BT2936	0.30	+0.4
3,693,623	-		BT2936	0.32	-0.5
3,693,632	-		BT2936	0.33	+5.0
3,693,632	-		BT2936	0.33	+3.0
3,693,633	+		BT2936	0.33	-0.1
3,693,633	+		BT2936	0.33	+1.0
3,693,633	+		BT2936	0.33	+0.9
3,693,644	-		BT2936	0.34	+0.3
3,693,782	-		BT2936	0.45	+3.3
3,693,812	+		BT2936	0.48	+0.3
3,694,118	+		BT2936	0.73	+0.6
3,694,152	-		BT2936	0.76	+2.6
3,694,196	+		BT2936	0.80	+0.4
3,694,292	-		BT2936	0.88	+5.3
3,694,301	-		BT2936	0.89	+3.6
3,694,301	-		BT2936	0.89	+1.9
3,694,442	+				+2.9
3,694,450	+				+0.6
3,694,451	-				+6.0
3,694,462	+				-1.1
3,694,482	+				+0.1
3,694,558	+		BT2937	0.11	+1.0
3,694,645	+		BT2937	0.19	-2.3
3,694,745	+		BT2937	0.27	+1.5
3,694,900	+		BT2937	0.41	+1.6
3,694,901	-		BT2937	0.41	+2.2
3,695,044	+		BT2937	0.54	-3.2
3,695,260	+		BT2937	0.73	+1.8
3,695,353	+		BT2937	0.81	-2.3
3,695,528	-				+3.0
3,695,559	-				+5.7
3,695,560	+				-1.4
3,695,561	-				-0.5
3,695,572	-				-1.7
3,695,579	-				+2.6
3,695,601	-				+5.4
3,695,675	-				+0.5
3,695,718	-		BT2938	0.13	+7.7
3,695,844	+		BT2938	0.23	+2.9
3,695,873	-		BT2938	0.25	+4.7
3,696,114	-		BT2938	0.45	+2.7
3,696,468	-		BT2938	0.74	+2.7
3,696,515	+		BT2938	0.78	+4.5