Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2840

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml
3,542,151	-				-2.2
3,542,481	-				-3.0
3,542,624	-		BT2840	0.24	-0.9
3,542,624	-		BT2840	0.24	-0.9
3,542,639	-		BT2840	0.27	-1.5
3,542,641	-		BT2840	0.27	-0.4
3,542,641	-		BT2840	0.27	+0.6
3,542,641	-		BT2840	0.27	-3.0
3,542,641	-		BT2840	0.27	-1.2
3,542,664	-		BT2840	0.31	+2.0
3,542,699	-		BT2840	0.36	-2.1
3,542,699	-		BT2840	0.36	+1.1
3,542,825	-		BT2840	0.56	-0.3
3,542,840	-		BT2840	0.58	-1.1
3,542,852	-		BT2840	0.60	-0.4
3,542,852	-		BT2840	0.60	-2.0
3,542,852	-		BT2840	0.60	+0.1
3,542,852	-		BT2840	0.60	+0.6
3,542,911	-		BT2840	0.69	-1.7
3,542,930	-		BT2840	0.72	-1.0
3,542,996	-		BT2840	0.83	-2.6
3,543,023	-		BT2840	0.87	-0.4
3,543,065	-				-0.5
3,543,077	-				+0.5
3,543,089	-				-0.3
3,543,134	-				+0.9
3,543,225	-				+2.7
3,543,240	-				+0.1
3,543,258	-				+1.4
3,543,311	-		BT2841	0.12	-0.3
3,543,314	-		BT2841	0.12	-0.9