Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1322

Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml
1,646,184	-				-1.8
1,646,224	-				-2.9
1,646,236	+				+0.8
1,646,291	-				+3.5
1,646,337	-				-3.7
1,646,425	-		BT1321	0.21	-1.9
1,646,435	-		BT1321	0.22	+0.8
1,646,478	-		BT1321	0.28	+1.8
1,646,532	+		BT1321	0.35	-1.0
1,646,709	+		BT1321	0.58	-3.3
1,646,724	-		BT1321	0.60	+0.1
1,646,807	+		BT1321	0.71	-0.8
1,646,808	-		BT1321	0.71	+1.5
1,646,810	+		BT1321	0.71	-2.6
1,646,984	-				-1.3
1,647,026	+				-1.0
1,647,131	+		BT1322	0.11	-0.0
1,647,132	-		BT1322	0.11	+1.7
1,647,132	-		BT1322	0.11	-0.1
1,647,142	+		BT1322	0.12	+1.0
1,647,142	+		BT1322	0.12	-0.5
1,647,183	-		BT1322	0.17	-2.5
1,647,204	+		BT1322	0.19	+0.6
1,647,245	+		BT1322	0.24	+2.6
1,647,307	+		BT1322	0.31	-0.3
1,647,790	+		BT1322	0.86	-0.1
1,647,792	+		BT1322	0.87	-0.2
1,647,829	-				+2.4
1,647,894	+				-1.6
1,647,920	-				-0.8
1,647,945	+				+0.0
1,647,945	+				-0.1
1,647,968	+				+1.3
1,647,968	+				-1.5
1,647,986	+				-2.5
1,648,210	+		BT1323	0.25	-0.9
1,648,216	+		BT1323	0.25	-2.6
1,648,218	+		BT1323	0.26	-1.7
1,648,218	+		BT1323	0.26	+1.3
1,648,218	+		BT1323	0.26	-3.1
1,648,220	+		BT1323	0.26	-1.7
1,648,315	+		BT1323	0.34	+0.9
1,648,342	+		BT1323	0.36	-2.0
1,648,444	+		BT1323	0.45	-1.7
1,648,517	-		BT1323	0.51	-0.6
1,648,618	+		BT1323	0.59	+0.2
1,648,667	-		BT1323	0.63	-0.8
1,648,669	+		BT1323	0.63	+0.9
1,648,669	+		BT1323	0.63	-1.4
1,648,708	+		BT1323	0.67	-0.5
1,648,779	+		BT1323	0.73	-0.5
1,648,810	+		BT1323	0.75	-0.8
1,648,812	+		BT1323	0.75	-3.3