Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0747
Experiment: Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
924,463 | + | BT0746 | 0.31 | +4.0 | |
924,508 | + | BT0746 | 0.35 | -0.7 | |
924,645 | - | BT0746 | 0.45 | +1.4 | |
924,847 | + | BT0746 | 0.61 | +3.8 | |
924,847 | + | BT0746 | 0.61 | +0.4 | |
924,886 | - | BT0746 | 0.64 | +2.0 | |
924,937 | + | BT0746 | 0.68 | -0.7 | |
924,961 | + | BT0746 | 0.70 | -4.0 | |
925,136 | - | BT0746 | 0.83 | +3.2 | |
925,296 | - | +0.8 | |||
926,080 | + | BT0747 | 0.55 | -1.4 | |
926,214 | + | BT0747 | 0.67 | -2.0 | |
926,219 | - | BT0747 | 0.67 | -0.4 | |
926,376 | + | BT0747 | 0.81 | -1.9 | |
926,700 | + | -2.7 |
Or see this region's nucleotide sequence