Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_5085 and Psyr_5086 are separated by 630 nucleotides Psyr_5086 and Psyr_5087 are separated by 94 nucleotides
Psyr_5085: Psyr_5085 - Twin-arginine translocation pathway signal, at 6,031,871 to 6,033,490
_5085
Psyr_5086: Psyr_5086 - membrane protein, putative, at 6,034,121 to 6,035,359
_5086
Psyr_5087: Psyr_5087 - Acyltransferase 3, at 6,035,454 to 6,037,337
_5087
Position (kb)
6034
6035
6036 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6033.424 kb on + strand at 6033.424 kb on + strand at 6033.425 kb on - strand at 6033.446 kb on + strand at 6033.452 kb on + strand at 6033.453 kb on - strand at 6033.483 kb on - strand at 6033.549 kb on + strand at 6033.549 kb on + strand at 6033.549 kb on + strand at 6033.549 kb on + strand at 6033.549 kb on + strand at 6033.549 kb on + strand at 6033.549 kb on + strand at 6033.550 kb on - strand at 6033.550 kb on - strand at 6033.550 kb on - strand at 6033.550 kb on - strand at 6033.550 kb on - strand at 6033.579 kb on + strand at 6033.579 kb on + strand at 6033.580 kb on - strand at 6033.580 kb on - strand at 6033.580 kb on - strand at 6033.580 kb on - strand at 6033.580 kb on - strand at 6033.745 kb on - strand at 6033.774 kb on + strand at 6033.774 kb on + strand at 6033.774 kb on + strand at 6033.775 kb on - strand at 6033.775 kb on - strand at 6033.775 kb on - strand at 6033.903 kb on - strand at 6033.903 kb on - strand at 6033.907 kb on - strand at 6033.907 kb on - strand at 6033.907 kb on - strand at 6033.907 kb on - strand at 6033.935 kb on + strand at 6033.935 kb on + strand at 6033.935 kb on + strand at 6033.935 kb on + strand at 6033.936 kb on - strand at 6033.936 kb on - strand at 6033.936 kb on - strand at 6033.936 kb on - strand at 6033.936 kb on - strand at 6033.936 kb on - strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.937 kb on + strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6033.938 kb on - strand at 6034.028 kb on + strand at 6034.056 kb on + strand at 6034.057 kb on - strand at 6034.057 kb on - strand at 6034.057 kb on - strand at 6034.057 kb on - strand at 6034.205 kb on + strand at 6034.205 kb on + strand at 6034.206 kb on - strand at 6034.206 kb on - strand at 6034.206 kb on - strand at 6034.206 kb on - strand at 6034.206 kb on - strand at 6034.238 kb on + strand at 6034.238 kb on + strand at 6034.238 kb on + strand at 6034.238 kb on + strand at 6034.238 kb on + strand at 6034.238 kb on + strand at 6034.238 kb on + strand at 6034.238 kb on + strand at 6034.239 kb on - strand at 6034.239 kb on - strand at 6034.446 kb on - strand, within Psyr_5086 at 6034.545 kb on - strand, within Psyr_5086 at 6034.550 kb on + strand, within Psyr_5086 at 6034.550 kb on + strand, within Psyr_5086 at 6034.550 kb on + strand, within Psyr_5086 at 6034.550 kb on + strand, within Psyr_5086 at 6034.550 kb on + strand, within Psyr_5086 at 6034.550 kb on + strand, within Psyr_5086 at 6034.551 kb on - strand, within Psyr_5086 at 6034.551 kb on - strand, within Psyr_5086 at 6034.551 kb on - strand, within Psyr_5086 at 6034.582 kb on + strand, within Psyr_5086 at 6034.583 kb on - strand, within Psyr_5086 at 6034.583 kb on - strand, within Psyr_5086 at 6034.664 kb on + strand, within Psyr_5086 at 6034.664 kb on + strand, within Psyr_5086 at 6034.665 kb on - strand, within Psyr_5086 at 6034.665 kb on - strand, within Psyr_5086 at 6034.665 kb on - strand, within Psyr_5086 at 6034.673 kb on + strand, within Psyr_5086 at 6034.673 kb on + strand, within Psyr_5086 at 6034.673 kb on + strand, within Psyr_5086 at 6034.673 kb on + strand, within Psyr_5086 at 6034.673 kb on + strand, within Psyr_5086 at 6034.673 kb on + strand, within Psyr_5086 at 6034.674 kb on - strand, within Psyr_5086 at 6034.674 kb on - strand, within Psyr_5086 at 6034.734 kb on - strand, within Psyr_5086 at 6034.734 kb on - strand, within Psyr_5086 at 6034.734 kb on - strand, within Psyr_5086 at 6034.734 kb on - strand, within Psyr_5086 at 6034.848 kb on + strand, within Psyr_5086 at 6034.937 kb on + strand, within Psyr_5086 at 6034.938 kb on - strand, within Psyr_5086 at 6035.067 kb on + strand, within Psyr_5086 at 6035.068 kb on - strand, within Psyr_5086 at 6035.068 kb on - strand, within Psyr_5086 at 6035.097 kb on - strand, within Psyr_5086 at 6035.097 kb on - strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.135 kb on + strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.136 kb on - strand, within Psyr_5086 at 6035.195 kb on - strand, within Psyr_5086 at 6035.506 kb on + strand at 6035.583 kb on + strand at 6035.584 kb on - strand at 6035.646 kb on + strand, within Psyr_5087 at 6035.646 kb on + strand, within Psyr_5087 at 6035.646 kb on + strand, within Psyr_5087 at 6035.646 kb on + strand, within Psyr_5087 at 6035.646 kb on + strand, within Psyr_5087 at 6035.646 kb on + strand, within Psyr_5087 at 6035.647 kb on - strand, within Psyr_5087 at 6035.647 kb on - strand, within Psyr_5087 at 6035.740 kb on - strand, within Psyr_5087 at 6035.740 kb on - strand, within Psyr_5087 at 6035.796 kb on + strand, within Psyr_5087 at 6035.814 kb on + strand, within Psyr_5087 at 6035.815 kb on - strand, within Psyr_5087 at 6035.884 kb on - strand, within Psyr_5087 at 6035.884 kb on - strand, within Psyr_5087 at 6035.884 kb on - strand, within Psyr_5087 at 6035.989 kb on + strand, within Psyr_5087 at 6035.990 kb on - strand, within Psyr_5087 at 6036.025 kb on - strand, within Psyr_5087 at 6036.187 kb on - strand, within Psyr_5087 at 6036.294 kb on + strand, within Psyr_5087 at 6036.303 kb on + strand, within Psyr_5087 at 6036.303 kb on + strand, within Psyr_5087 at 6036.303 kb on + strand, within Psyr_5087 at 6036.304 kb on - strand, within Psyr_5087 at 6036.304 kb on - strand, within Psyr_5087 at 6036.304 kb on - strand, within Psyr_5087 at 6036.304 kb on - strand, within Psyr_5087 at 6036.304 kb on - strand, within Psyr_5087
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 6,033,424 + +0.6 6,033,424 + -0.7 6,033,425 - +0.5 6,033,446 + -0.4 6,033,452 + +0.5 6,033,453 - +1.5 6,033,483 - -0.2 6,033,549 + +0.1 6,033,549 + -0.4 6,033,549 + -0.7 6,033,549 + -0.8 6,033,549 + +1.7 6,033,549 + +0.7 6,033,549 + -0.2 6,033,550 - +1.6 6,033,550 - -0.4 6,033,550 - +0.3 6,033,550 - +1.2 6,033,550 - +0.5 6,033,579 + +0.6 6,033,579 + +0.2 6,033,580 - -0.6 6,033,580 - -0.6 6,033,580 - -0.2 6,033,580 - +0.1 6,033,580 - -0.6 6,033,745 - -3.4 6,033,774 + -1.1 6,033,774 + -0.1 6,033,774 + -1.8 6,033,775 - +0.4 6,033,775 - -1.4 6,033,775 - +0.4 6,033,903 - -1.9 6,033,903 - +1.3 6,033,907 - -1.9 6,033,907 - +1.2 6,033,907 - +0.9 6,033,907 - +1.5 6,033,935 + -0.1 6,033,935 + +0.2 6,033,935 + -1.7 6,033,935 + +0.3 6,033,936 - -1.7 6,033,936 - +0.5 6,033,936 - -0.8 6,033,936 - -1.7 6,033,936 - -2.7 6,033,936 - +1.2 6,033,937 + -2.8 6,033,937 + -2.4 6,033,937 + -0.5 6,033,937 + +0.2 6,033,937 + -0.9 6,033,937 + -0.9 6,033,937 + -1.3 6,033,937 + -0.3 6,033,937 + +0.2 6,033,937 + -0.3 6,033,937 + -0.1 6,033,937 + +0.5 6,033,937 + +1.2 6,033,937 + -1.2 6,033,937 + +0.4 6,033,937 + +0.3 6,033,937 + +0.0 6,033,937 + -0.1 6,033,938 - -0.7 6,033,938 - -0.5 6,033,938 - -0.9 6,033,938 - +1.1 6,033,938 - +0.1 6,033,938 - -0.2 6,033,938 - +2.2 6,033,938 - -0.9 6,033,938 - +0.3 6,033,938 - -0.7 6,033,938 - -1.5 6,033,938 - +0.0 6,033,938 - +0.3 6,033,938 - +0.1 6,033,938 - +1.0 6,033,938 - +0.0 6,033,938 - -1.1 6,034,028 + -1.1 6,034,056 + +0.2 6,034,057 - +0.3 6,034,057 - +0.1 6,034,057 - -0.8 6,034,057 - +0.9 6,034,205 + -1.9 6,034,205 + +0.4 6,034,206 - +1.4 6,034,206 - -0.4 6,034,206 - +0.2 6,034,206 - -0.5 6,034,206 - -1.4 6,034,238 + +0.0 6,034,238 + +0.2 6,034,238 + -2.8 6,034,238 + -0.7 6,034,238 + +0.1 6,034,238 + +1.1 6,034,238 + -1.4 6,034,238 + +0.5 6,034,239 - -0.4 6,034,239 - +0.2 6,034,446 - Psyr_5086 0.26 +1.6 6,034,545 - Psyr_5086 0.34 +0.7 6,034,550 + Psyr_5086 0.35 -1.1 6,034,550 + Psyr_5086 0.35 +1.0 6,034,550 + Psyr_5086 0.35 -1.1 6,034,550 + Psyr_5086 0.35 +1.3 6,034,550 + Psyr_5086 0.35 +2.2 6,034,550 + Psyr_5086 0.35 +0.2 6,034,551 - Psyr_5086 0.35 -0.7 6,034,551 - Psyr_5086 0.35 +0.4 6,034,551 - Psyr_5086 0.35 +1.2 6,034,582 + Psyr_5086 0.37 +0.7 6,034,583 - Psyr_5086 0.37 +1.1 6,034,583 - Psyr_5086 0.37 -0.9 6,034,664 + Psyr_5086 0.44 -0.0 6,034,664 + Psyr_5086 0.44 +0.9 6,034,665 - Psyr_5086 0.44 -1.2 6,034,665 - Psyr_5086 0.44 +0.1 6,034,665 - Psyr_5086 0.44 +0.7 6,034,673 + Psyr_5086 0.45 -0.0 6,034,673 + Psyr_5086 0.45 +0.6 6,034,673 + Psyr_5086 0.45 +0.9 6,034,673 + Psyr_5086 0.45 +0.4 6,034,673 + Psyr_5086 0.45 +0.7 6,034,673 + Psyr_5086 0.45 +0.1 6,034,674 - Psyr_5086 0.45 +2.2 6,034,674 - Psyr_5086 0.45 -0.2 6,034,734 - Psyr_5086 0.49 +1.4 6,034,734 - Psyr_5086 0.49 +1.5 6,034,734 - Psyr_5086 0.49 +0.9 6,034,734 - Psyr_5086 0.49 +0.5 6,034,848 + Psyr_5086 0.59 +0.5 6,034,937 + Psyr_5086 0.66 +0.4 6,034,938 - Psyr_5086 0.66 +0.4 6,035,067 + Psyr_5086 0.76 +0.9 6,035,068 - Psyr_5086 0.76 +0.3 6,035,068 - Psyr_5086 0.76 +1.4 6,035,097 - Psyr_5086 0.79 -0.7 6,035,097 - Psyr_5086 0.79 +0.8 6,035,135 + Psyr_5086 0.82 +1.1 6,035,135 + Psyr_5086 0.82 +0.7 6,035,135 + Psyr_5086 0.82 -1.8 6,035,135 + Psyr_5086 0.82 -1.7 6,035,135 + Psyr_5086 0.82 +0.0 6,035,135 + Psyr_5086 0.82 +0.9 6,035,135 + Psyr_5086 0.82 +0.9 6,035,135 + Psyr_5086 0.82 -2.7 6,035,135 + Psyr_5086 0.82 +0.3 6,035,135 + Psyr_5086 0.82 -0.1 6,035,135 + Psyr_5086 0.82 -0.4 6,035,135 + Psyr_5086 0.82 +0.4 6,035,135 + Psyr_5086 0.82 +2.4 6,035,136 - Psyr_5086 0.82 +0.4 6,035,136 - Psyr_5086 0.82 +1.2 6,035,136 - Psyr_5086 0.82 +1.5 6,035,136 - Psyr_5086 0.82 -0.7 6,035,136 - Psyr_5086 0.82 +0.5 6,035,136 - Psyr_5086 0.82 +2.0 6,035,136 - Psyr_5086 0.82 -3.3 6,035,136 - Psyr_5086 0.82 +0.8 6,035,136 - Psyr_5086 0.82 +0.6 6,035,136 - Psyr_5086 0.82 -1.7 6,035,136 - Psyr_5086 0.82 +0.9 6,035,136 - Psyr_5086 0.82 +0.8 6,035,136 - Psyr_5086 0.82 -2.1 6,035,136 - Psyr_5086 0.82 -0.8 6,035,136 - Psyr_5086 0.82 -0.5 6,035,136 - Psyr_5086 0.82 +1.7 6,035,136 - Psyr_5086 0.82 +0.6 6,035,136 - Psyr_5086 0.82 -1.1 6,035,136 - Psyr_5086 0.82 -0.4 6,035,136 - Psyr_5086 0.82 +0.0 6,035,136 - Psyr_5086 0.82 +0.3 6,035,136 - Psyr_5086 0.82 +0.8 6,035,136 - Psyr_5086 0.82 +0.6 6,035,136 - Psyr_5086 0.82 -0.3 6,035,195 - Psyr_5086 0.87 +0.6 6,035,506 + -0.6 6,035,583 + -0.2 6,035,584 - +0.7 6,035,646 + Psyr_5087 0.10 -0.1 6,035,646 + Psyr_5087 0.10 +0.6 6,035,646 + Psyr_5087 0.10 -1.5 6,035,646 + Psyr_5087 0.10 +0.1 6,035,646 + Psyr_5087 0.10 -0.5 6,035,646 + Psyr_5087 0.10 +0.5 6,035,647 - Psyr_5087 0.10 -1.1 6,035,647 - Psyr_5087 0.10 +0.8 6,035,740 - Psyr_5087 0.15 +0.4 6,035,740 - Psyr_5087 0.15 +0.3 6,035,796 + Psyr_5087 0.18 +0.7 6,035,814 + Psyr_5087 0.19 +0.5 6,035,815 - Psyr_5087 0.19 +1.4 6,035,884 - Psyr_5087 0.23 +0.0 6,035,884 - Psyr_5087 0.23 -0.9 6,035,884 - Psyr_5087 0.23 -2.5 6,035,989 + Psyr_5087 0.28 +1.0 6,035,990 - Psyr_5087 0.28 -0.2 6,036,025 - Psyr_5087 0.30 +0.3 6,036,187 - Psyr_5087 0.39 +0.1 6,036,294 + Psyr_5087 0.45 +0.2 6,036,303 + Psyr_5087 0.45 -0.3 6,036,303 + Psyr_5087 0.45 +1.9 6,036,303 + Psyr_5087 0.45 -0.1 6,036,304 - Psyr_5087 0.45 +1.7 6,036,304 - Psyr_5087 0.45 -0.1 6,036,304 - Psyr_5087 0.45 +0.6 6,036,304 - Psyr_5087 0.45 -0.6 6,036,304 - Psyr_5087 0.45 -0.4
Or see this region's nucleotide sequence