Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4758 and Psyr_4759 are separated by 98 nucleotides Psyr_4759 and Psyr_4760 are separated by 9 nucleotides Psyr_4760 and Psyr_4761 are separated by 97 nucleotides Psyr_4761 and Psyr_4762 are separated by 45 nucleotides
Psyr_4758: Psyr_4758 - Phosphopantetheine adenylyltransferase, at 5,634,887 to 5,635,366
_4758
Psyr_4759: Psyr_4759 - 4Fe-4S ferredoxin, iron-sulfur binding protein, at 5,635,465 to 5,635,716
_4759
Psyr_4760: Psyr_4760 - conserved hypothetical protein, at 5,635,726 to 5,636,064
_4760
Psyr_4761: Psyr_4761 - DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase, at 5,636,162 to 5,636,974
_4761
Psyr_4762: Psyr_4762 - conserved hypothetical protein, at 5,637,020 to 5,637,886
_4762
Position (kb) 5635
5636
5637 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5634.744 kb on + strand at 5634.796 kb on - strand at 5635.365 kb on - strand at 5635.428 kb on + strand at 5635.727 kb on + strand at 5635.728 kb on - strand at 5635.958 kb on + strand, within Psyr_4760 at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.091 kb on - strand at 5636.091 kb on - strand at 5636.091 kb on - strand at 5636.091 kb on - strand at 5636.091 kb on - strand at 5636.094 kb on + strand at 5636.094 kb on + strand at 5636.094 kb on + strand at 5636.095 kb on - strand at 5636.108 kb on + strand at 5636.108 kb on + strand at 5636.108 kb on + strand at 5636.108 kb on + strand at 5636.109 kb on - strand at 5636.109 kb on - strand at 5636.109 kb on - strand at 5636.110 kb on + strand at 5636.110 kb on + strand at 5636.110 kb on + strand at 5636.110 kb on + strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.128 kb on - strand at 5636.158 kb on + strand at 5636.158 kb on + strand at 5636.158 kb on + strand at 5636.158 kb on + strand at 5636.158 kb on + strand at 5636.159 kb on - strand at 5636.159 kb on - strand at 5636.159 kb on - strand at 5636.159 kb on - strand at 5636.184 kb on + strand at 5636.185 kb on - strand at 5636.185 kb on - strand at 5636.460 kb on + strand, within Psyr_4761 at 5636.460 kb on + strand, within Psyr_4761 at 5636.460 kb on + strand, within Psyr_4761 at 5636.460 kb on + strand, within Psyr_4761 at 5636.460 kb on + strand, within Psyr_4761 at 5636.460 kb on + strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.464 kb on + strand, within Psyr_4761 at 5636.464 kb on + strand, within Psyr_4761 at 5636.464 kb on + strand, within Psyr_4761 at 5636.464 kb on + strand, within Psyr_4761 at 5636.465 kb on - strand, within Psyr_4761 at 5636.541 kb on + strand, within Psyr_4761 at 5636.659 kb on - strand, within Psyr_4761 at 5636.799 kb on + strand, within Psyr_4761 at 5636.799 kb on + strand, within Psyr_4761 at 5636.800 kb on - strand, within Psyr_4761 at 5636.800 kb on - strand, within Psyr_4761 at 5636.800 kb on - strand, within Psyr_4761 at 5636.800 kb on - strand, within Psyr_4761 at 5636.964 kb on - strand at 5636.964 kb on - strand at 5637.057 kb on + strand at 5637.057 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 5,634,744 + -0.0 5,634,796 - +0.7 5,635,365 - +0.1 5,635,428 + -0.1 5,635,727 + +1.2 5,635,728 - -2.8 5,635,958 + Psyr_4760 0.68 -0.2 5,636,090 + -0.6 5,636,090 + -0.5 5,636,090 + -1.2 5,636,090 + -0.3 5,636,090 + +2.1 5,636,090 + +0.2 5,636,090 + +2.7 5,636,090 + +0.2 5,636,091 - -2.6 5,636,091 - -0.2 5,636,091 - -0.8 5,636,091 - -0.3 5,636,091 - -0.6 5,636,094 + +0.0 5,636,094 + +0.5 5,636,094 + +1.6 5,636,095 - +0.1 5,636,108 + -0.2 5,636,108 + -0.4 5,636,108 + +0.1 5,636,108 + -0.5 5,636,109 - -0.2 5,636,109 - +1.3 5,636,109 - +1.1 5,636,110 + -2.0 5,636,110 + -1.7 5,636,110 + +1.5 5,636,110 + -2.8 5,636,111 - -1.3 5,636,111 - -0.7 5,636,111 - +0.7 5,636,111 - -3.0 5,636,111 - -1.5 5,636,111 - -2.6 5,636,128 - -0.2 5,636,158 + +1.1 5,636,158 + +0.8 5,636,158 + +1.4 5,636,158 + +0.4 5,636,158 + +0.1 5,636,159 - -0.8 5,636,159 - +0.3 5,636,159 - +0.6 5,636,159 - +1.1 5,636,184 + +1.6 5,636,185 - -0.2 5,636,185 - +1.1 5,636,460 + Psyr_4761 0.37 +1.6 5,636,460 + Psyr_4761 0.37 -3.3 5,636,460 + Psyr_4761 0.37 -1.8 5,636,460 + Psyr_4761 0.37 +0.8 5,636,460 + Psyr_4761 0.37 -0.4 5,636,460 + Psyr_4761 0.37 +0.6 5,636,461 - Psyr_4761 0.37 +0.3 5,636,461 - Psyr_4761 0.37 +0.1 5,636,461 - Psyr_4761 0.37 +0.3 5,636,461 - Psyr_4761 0.37 -0.8 5,636,461 - Psyr_4761 0.37 -1.0 5,636,461 - Psyr_4761 0.37 -0.5 5,636,461 - Psyr_4761 0.37 -2.1 5,636,464 + Psyr_4761 0.37 -1.1 5,636,464 + Psyr_4761 0.37 -0.6 5,636,464 + Psyr_4761 0.37 +0.2 5,636,464 + Psyr_4761 0.37 +0.4 5,636,465 - Psyr_4761 0.37 -0.8 5,636,541 + Psyr_4761 0.47 +1.1 5,636,659 - Psyr_4761 0.61 -0.7 5,636,799 + Psyr_4761 0.78 +1.1 5,636,799 + Psyr_4761 0.78 +0.7 5,636,800 - Psyr_4761 0.78 -0.6 5,636,800 - Psyr_4761 0.78 +0.0 5,636,800 - Psyr_4761 0.78 -1.6 5,636,800 - Psyr_4761 0.78 -0.9 5,636,964 - -1.1 5,636,964 - -0.9 5,637,057 + +2.1 5,637,057 + +0.6
Or see this region's nucleotide sequence