Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4349 and Psyr_4350 are separated by 66 nucleotides Psyr_4350 and Psyr_4351 are separated by 120 nucleotides Psyr_4351 and Psyr_4352 are separated by 314 nucleotides
Psyr_4349: Psyr_4349 - Apolipoprotein N-acyltransferase, at 5,202,195 to 5,203,715
_4349
Psyr_4350: Psyr_4350 - Protein of unknown function DUF218, at 5,203,782 to 5,204,552
_4350
Psyr_4351: Psyr_4351 - conserved domain protein, at 5,204,673 to 5,205,014
_4351
Psyr_4352: Psyr_4352 - leucyl-tRNA synthetase, at 5,205,329 to 5,207,935
_4352
Position (kb) 5204
5205
5206 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5203.810 kb on + strand at 5204.015 kb on + strand, within Psyr_4350 at 5204.015 kb on + strand, within Psyr_4350 at 5204.015 kb on + strand, within Psyr_4350 at 5204.373 kb on - strand, within Psyr_4350 at 5204.581 kb on + strand at 5204.581 kb on + strand at 5204.581 kb on + strand at 5204.630 kb on - strand at 5204.674 kb on + strand at 5204.674 kb on + strand at 5204.675 kb on - strand at 5204.694 kb on + strand at 5204.842 kb on + strand, within Psyr_4351 at 5204.842 kb on + strand, within Psyr_4351 at 5204.843 kb on - strand, within Psyr_4351 at 5204.928 kb on - strand, within Psyr_4351 at 5204.974 kb on + strand, within Psyr_4351 at 5204.974 kb on + strand, within Psyr_4351 at 5204.974 kb on + strand, within Psyr_4351 at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.991 kb on + strand at 5204.992 kb on - strand at 5204.992 kb on - strand at 5204.992 kb on - strand at 5204.992 kb on - strand at 5204.992 kb on - strand at 5205.034 kb on + strand at 5205.034 kb on + strand at 5205.035 kb on - strand at 5205.090 kb on - strand at 5205.106 kb on + strand at 5205.106 kb on + strand at 5205.106 kb on + strand at 5205.106 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.178 kb on + strand at 5205.183 kb on + strand at 5205.197 kb on + strand at 5205.197 kb on + strand at 5205.307 kb on + strand at 5205.307 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 5,203,810 + +0.0 5,204,015 + Psyr_4350 0.30 -0.8 5,204,015 + Psyr_4350 0.30 +0.1 5,204,015 + Psyr_4350 0.30 -2.0 5,204,373 - Psyr_4350 0.77 -0.9 5,204,581 + -0.1 5,204,581 + +0.3 5,204,581 + +1.4 5,204,630 - +0.4 5,204,674 + +0.6 5,204,674 + -0.6 5,204,675 - -0.8 5,204,694 + +0.2 5,204,842 + Psyr_4351 0.49 -0.2 5,204,842 + Psyr_4351 0.49 -0.9 5,204,843 - Psyr_4351 0.50 -3.0 5,204,928 - Psyr_4351 0.75 -2.5 5,204,974 + Psyr_4351 0.88 -0.7 5,204,974 + Psyr_4351 0.88 -1.4 5,204,974 + Psyr_4351 0.88 +0.2 5,204,991 + -1.1 5,204,991 + -1.5 5,204,991 + +1.1 5,204,991 + +3.6 5,204,991 + -2.4 5,204,991 + -2.5 5,204,991 + -0.2 5,204,991 + +0.4 5,204,991 + -2.2 5,204,991 + -2.4 5,204,991 + -2.0 5,204,991 + +0.5 5,204,991 + -0.8 5,204,991 + +0.0 5,204,991 + -1.0 5,204,991 + +1.6 5,204,991 + +1.1 5,204,991 + -1.3 5,204,991 + +0.6 5,204,991 + +0.0 5,204,991 + -0.7 5,204,991 + -0.4 5,204,991 + +0.2 5,204,991 + +1.2 5,204,991 + -0.7 5,204,992 - -1.5 5,204,992 - -2.2 5,204,992 - -1.2 5,204,992 - -2.5 5,204,992 - -2.2 5,205,034 + -3.4 5,205,034 + +0.5 5,205,035 - -0.8 5,205,090 - -2.8 5,205,106 + -1.9 5,205,106 + -0.0 5,205,106 + +0.1 5,205,106 + -2.0 5,205,178 + +0.3 5,205,178 + -1.1 5,205,178 + +0.7 5,205,178 + +1.4 5,205,178 + +0.1 5,205,178 + +0.9 5,205,178 + -0.3 5,205,178 + +0.1 5,205,178 + -1.0 5,205,178 + -1.7 5,205,178 + -0.7 5,205,178 + -0.1 5,205,178 + +2.2 5,205,178 + +1.1 5,205,178 + +0.6 5,205,178 + +0.8 5,205,178 + -0.7 5,205,178 + -1.0 5,205,178 + +0.2 5,205,178 + +1.1 5,205,178 + +1.7 5,205,178 + -0.6 5,205,178 + +1.1 5,205,178 + -0.8 5,205,178 + -0.5 5,205,178 + +0.2 5,205,178 + -1.3 5,205,178 + +0.4 5,205,178 + -0.5 5,205,178 + +0.3 5,205,178 + +1.0 5,205,178 + -2.4 5,205,178 + +0.7 5,205,178 + -1.8 5,205,178 + +0.6 5,205,178 + +0.1 5,205,178 + -0.1 5,205,178 + -0.2 5,205,178 + +0.3 5,205,178 + +0.9 5,205,183 + -0.6 5,205,197 + +1.4 5,205,197 + -0.8 5,205,307 + +0.4 5,205,307 + -0.3
Or see this region's nucleotide sequence