Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3245

Experiment: KB with Fusaric 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Fusaric 250 ug/ml
3,885,136	+		Psyr_3244	0.32	+0.6
3,885,136	+		Psyr_3244	0.32	+1.6
3,885,136	+		Psyr_3244	0.32	-3.8
3,885,136	+		Psyr_3244	0.32	+0.4
3,885,137	-		Psyr_3244	0.32	-0.8
3,885,137	-		Psyr_3244	0.32	-0.4
3,885,137	-		Psyr_3244	0.32	+1.4
3,885,137	-		Psyr_3244	0.32	-0.4
3,885,137	-		Psyr_3244	0.32	-0.4
3,885,164	-		Psyr_3244	0.34	-0.9
3,885,180	+		Psyr_3244	0.35	-0.2
3,885,184	+		Psyr_3244	0.36	-1.0
3,885,260	+		Psyr_3244	0.41	-0.5
3,885,260	+		Psyr_3244	0.41	-2.3
3,885,261	-		Psyr_3244	0.41	+0.1
3,885,261	-		Psyr_3244	0.41	+0.4
3,885,508	+		Psyr_3244	0.60	+0.5
3,885,509	-		Psyr_3244	0.60	-0.3
3,885,509	-		Psyr_3244	0.60	+1.2
3,885,509	-		Psyr_3244	0.60	+1.2
3,885,655	+		Psyr_3244	0.71	+1.3
3,885,656	-		Psyr_3244	0.71	+0.1
3,885,661	+		Psyr_3244	0.71	-0.7
3,885,661	+		Psyr_3244	0.71	+0.9
3,885,790	+		Psyr_3244	0.81	+0.7
3,885,790	+		Psyr_3244	0.81	-0.1
3,885,943	+				+0.4
3,885,944	-				+2.2
3,885,944	-				-1.2
3,885,944	-				-0.9
3,885,971	-				+0.3
3,886,076	+				-0.6
3,886,076	+				+0.3
3,886,077	-				+0.1
3,886,100	+				+0.2
3,886,100	+				+0.6
3,886,101	-				-0.9
3,886,101	-				+0.6
3,886,101	-				-0.0
3,886,703	+		Psyr_3245	0.22	-0.5
3,886,704	-		Psyr_3245	0.22	-0.3
3,886,704	-		Psyr_3245	0.22	-0.9
3,886,704	-		Psyr_3245	0.22	+0.9
3,886,939	+		Psyr_3245	0.31	+0.8
3,887,020	-		Psyr_3245	0.34	-0.5
3,887,020	-		Psyr_3245	0.34	-1.4
3,887,313	-		Psyr_3245	0.45	-2.1
3,887,365	+		Psyr_3245	0.47	-1.4
3,887,365	+		Psyr_3245	0.47	-0.7
3,887,365	+		Psyr_3245	0.47	-0.4
3,887,366	-		Psyr_3245	0.47	+0.7
3,887,366	-		Psyr_3245	0.47	-0.1
3,887,366	-		Psyr_3245	0.47	+1.1
3,887,366	-		Psyr_3245	0.47	-0.2
3,887,442	-		Psyr_3245	0.50	-0.5
3,887,515	+		Psyr_3245	0.53	-0.8
3,887,516	-		Psyr_3245	0.53	-0.4
3,887,725	+		Psyr_3245	0.61	-0.4
3,887,725	+		Psyr_3245	0.61	-0.6
3,887,725	+		Psyr_3245	0.61	-1.5
3,887,725	+		Psyr_3245	0.61	-0.8
3,887,728	+		Psyr_3245	0.61	-0.9
3,887,729	-		Psyr_3245	0.61	-1.9
3,887,729	-		Psyr_3245	0.61	+0.1
3,887,729	-		Psyr_3245	0.61	+1.0
3,887,971	+		Psyr_3245	0.71	-1.5
3,887,972	-		Psyr_3245	0.71	-2.7
3,888,365	-		Psyr_3245	0.86	-0.1
3,888,433	+		Psyr_3245	0.88	-0.5
3,888,433	+		Psyr_3245	0.88	-0.4
3,888,712	+				-0.5
3,888,712	+				-0.2
3,888,712	+				+1.5
3,888,712	+				-1.4
3,888,713	-				-0.1
3,888,778	+				+0.3
3,888,778	+				+1.2
3,888,779	-				-0.1
3,888,779	-				-0.9
3,889,261	+		Psyr_3246	0.56	-0.1
3,889,293	+		Psyr_3246	0.59	+0.8
3,889,383	-		Psyr_3246	0.69	-0.9
3,889,446	+		Psyr_3246	0.76	-0.4
3,889,447	-		Psyr_3246	0.76	-1.4
3,889,527	+		Psyr_3246	0.85	-1.9
3,889,610	+				-0.4
3,889,612	+				+0.6
3,889,612	+				+0.2
3,889,612	+				+0.2
3,889,612	+				-3.1
3,889,612	+				-0.5
3,889,612	+				-0.8
3,889,612	+				-1.6
3,889,613	-				+0.2
3,889,613	-				-0.5
3,889,613	-				+1.2