Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3072

Experiment: KB with Fusaric 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Fusaric 250 ug/ml
3,670,589	+		Psyr_3071	0.26	+1.3
3,670,590	-		Psyr_3071	0.26	+0.3
3,670,836	+		Psyr_3071	0.47	-1.0
3,670,837	-		Psyr_3071	0.47	+0.2
3,670,837	-		Psyr_3071	0.47	-0.2
3,670,837	-		Psyr_3071	0.47	-0.2
3,670,906	-		Psyr_3071	0.53	-0.4
3,670,906	-		Psyr_3071	0.53	-3.3
3,671,029	-		Psyr_3071	0.63	+0.5
3,671,051	+		Psyr_3071	0.65	-1.0
3,671,125	+		Psyr_3071	0.71	-2.2
3,671,125	+		Psyr_3071	0.71	-2.4
3,671,126	-		Psyr_3071	0.71	-0.8
3,671,126	-		Psyr_3071	0.71	+2.3
3,671,126	-		Psyr_3071	0.71	-0.2
3,671,126	-		Psyr_3071	0.71	-0.6
3,671,178	-		Psyr_3071	0.75	+0.9
3,671,338	+		Psyr_3071	0.89	-1.1
3,671,338	+		Psyr_3071	0.89	-0.1
3,671,338	+		Psyr_3071	0.89	+0.0
3,671,338	+		Psyr_3071	0.89	-0.5
3,671,339	-		Psyr_3071	0.89	+1.0
3,671,339	-		Psyr_3071	0.89	+1.5
3,671,339	-		Psyr_3071	0.89	-1.0
3,671,339	-		Psyr_3071	0.89	+0.5
3,671,339	-		Psyr_3071	0.89	+1.6
3,671,339	-		Psyr_3071	0.89	+3.2
3,671,339	-		Psyr_3071	0.89	-0.1
3,671,339	-		Psyr_3071	0.89	+0.3
3,671,339	-		Psyr_3071	0.89	+0.1
3,671,339	-		Psyr_3071	0.89	+0.5
3,671,440	+				-0.2
3,671,440	+				-2.5
3,671,440	+				+0.6
3,671,440	+				-0.6
3,671,440	+				-0.3
3,671,440	+				-1.4
3,671,440	+				+0.0
3,671,441	-				+0.1
3,671,441	-				+1.1
3,671,441	-				+0.6
3,671,441	-				-0.2
3,671,441	-				+0.1
3,671,441	-				-1.4
3,671,441	-				-0.1
3,671,470	-				-0.0
3,671,470	-				-0.6
3,671,560	+				-0.0
3,671,560	+				-2.1
3,671,560	+				+0.6
3,671,560	+				-0.5
3,671,560	+				-0.4
3,671,560	+				-0.1
3,671,561	-				+0.9
3,671,561	-				-2.1
3,671,561	-				-0.4
3,671,561	-				+1.2
3,671,638	+		Psyr_3072	0.17	+0.6
3,671,638	+		Psyr_3072	0.17	-3.4
3,671,650	+		Psyr_3072	0.18	+0.5
3,671,650	+		Psyr_3072	0.18	+0.6
3,671,650	+		Psyr_3072	0.18	+1.6
3,671,650	+		Psyr_3072	0.18	-1.2
3,671,650	+		Psyr_3072	0.18	-0.3
3,671,650	+		Psyr_3072	0.18	+0.2
3,671,650	+		Psyr_3072	0.18	+0.8
3,671,650	+		Psyr_3072	0.18	-0.2
3,671,651	-		Psyr_3072	0.18	+0.6
3,671,651	-		Psyr_3072	0.18	+1.7
3,671,651	-		Psyr_3072	0.18	-1.2
3,671,651	-		Psyr_3072	0.18	+0.1
3,671,651	-		Psyr_3072	0.18	-1.3
3,671,651	-		Psyr_3072	0.18	+1.2
3,671,651	-		Psyr_3072	0.18	-1.2
3,671,667	-		Psyr_3072	0.20	+0.2
3,671,687	+		Psyr_3072	0.21	+1.0
3,671,690	+		Psyr_3072	0.22	+1.4
3,671,690	+		Psyr_3072	0.22	-0.7
3,671,792	+		Psyr_3072	0.32	+3.1
3,671,793	-				-1.4
3,671,832	+		Psyr_3072	0.36	+1.4
3,671,832	+		Psyr_3072	0.36	+1.7
3,671,832	+		Psyr_3072	0.36	-0.8
3,671,832	+		Psyr_3072	0.36	-1.9
3,671,832	+		Psyr_3072	0.36	-0.8
3,671,832	+		Psyr_3072	0.36	-0.1
3,671,832	+		Psyr_3072	0.36	-0.4
3,671,833	-		Psyr_3072	0.36	+0.3
3,671,833	-		Psyr_3072	0.36	-0.8
3,671,833	-		Psyr_3072	0.36	-0.4
3,671,833	-		Psyr_3072	0.36	-0.8
3,671,833	-		Psyr_3072	0.36	+1.0
3,671,848	+		Psyr_3072	0.37	-0.5
3,671,848	+		Psyr_3072	0.37	+0.4
3,671,849	-		Psyr_3072	0.37	+0.8
3,671,849	-		Psyr_3072	0.37	-2.7
3,671,849	-		Psyr_3072	0.37	+0.6
3,671,849	-		Psyr_3072	0.37	+0.1
3,671,865	+		Psyr_3072	0.39	-0.9
3,671,865	+		Psyr_3072	0.39	+0.1
3,671,866	-		Psyr_3072	0.39	+0.2
3,671,866	-		Psyr_3072	0.39	-1.6
3,671,866	-		Psyr_3072	0.39	+0.4
3,671,866	-		Psyr_3072	0.39	+0.2
3,671,868	-		Psyr_3072	0.39	+1.0
3,671,906	+		Psyr_3072	0.43	-0.9
3,671,967	+		Psyr_3072	0.49	+0.7
3,671,968	-		Psyr_3072	0.49	+1.9
3,671,968	-		Psyr_3072	0.49	+0.1
3,671,984	+		Psyr_3072	0.50	+0.2
3,671,985	-		Psyr_3072	0.50	+1.5
3,671,985	-		Psyr_3072	0.50	+1.4
3,671,985	-		Psyr_3072	0.50	-0.2
3,672,105	-		Psyr_3072	0.62	+1.1
3,672,306	+		Psyr_3072	0.82	+0.9
3,672,483	+				-0.4
3,672,565	+				-4.1
3,672,566	-				-0.3
3,672,570	-				+0.4
3,672,570	-				-2.5
3,672,588	+				+0.0
3,672,588	+				-2.4
3,672,589	-				-0.2
3,672,589	-				-2.5
3,672,589	-				+1.0
3,672,589	-				+0.8
3,672,696	-				+1.5
3,672,795	+				-0.8
3,672,795	+				-2.5
3,672,795	+				+0.6
3,672,795	+				-1.9
3,672,795	+				-3.4
3,672,795	+				+0.5
3,672,796	-				-1.5
3,672,796	-				+0.4
3,672,796	-				-0.5
3,672,901	+		Psyr_3073	0.14	+0.0
3,672,905	-		Psyr_3073	0.14	-0.8
3,672,905	-		Psyr_3073	0.14	+0.4
3,673,062	+		Psyr_3073	0.32	+0.0
3,673,069	+		Psyr_3073	0.32	-2.5
3,673,070	-		Psyr_3073	0.33	+0.6
3,673,077	+		Psyr_3073	0.33	-1.5
3,673,105	-		Psyr_3073	0.36	-0.4
3,673,119	+		Psyr_3073	0.38	-2.0
3,673,120	-		Psyr_3073	0.38	-1.6
3,673,188	-		Psyr_3073	0.46	-3.4
3,673,190	-		Psyr_3073	0.46	+0.1
3,673,190	-		Psyr_3073	0.46	-0.8
3,673,449	+		Psyr_3073	0.74	-3.0
3,673,478	+		Psyr_3073	0.77	+2.8
3,673,478	+		Psyr_3073	0.77	-0.6
3,673,478	+		Psyr_3073	0.77	-0.2
3,673,478	+		Psyr_3073	0.77	+0.7
3,673,479	-		Psyr_3073	0.77	+1.4