Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2828

Experiment: KB with Fusaric 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Fusaric 250 ug/ml
3,400,804	-				-0.4
3,400,820	+				-0.7
3,400,820	+				-1.8
3,400,820	+				-0.5
3,400,821	-				-3.0
3,400,821	-				+1.3
3,400,929	+				+0.6
3,400,929	+				+1.3
3,400,929	+				-0.3
3,400,929	+				-3.2
3,400,929	+				+2.4
3,400,929	+				+1.4
3,400,929	+				-3.1
3,400,930	-				+2.0
3,400,930	-				+0.6
3,400,930	-				-0.5
3,400,930	-				-0.6
3,400,930	-				+0.3
3,400,930	-				+0.6
3,400,930	-				-0.7
3,401,063	+		Psyr_2827	0.23	-0.3
3,401,064	-		Psyr_2827	0.23	-0.6
3,401,064	-		Psyr_2827	0.23	-1.4
3,401,113	-		Psyr_2827	0.29	+0.1
3,401,169	+		Psyr_2827	0.35	+0.9
3,401,169	+		Psyr_2827	0.35	+0.1
3,401,170	-		Psyr_2827	0.35	-0.4
3,401,232	+		Psyr_2827	0.43	-1.4
3,401,232	+		Psyr_2827	0.43	-0.7
3,401,233	-		Psyr_2827	0.43	+0.7
3,401,233	-		Psyr_2827	0.43	-1.6
3,401,446	+		Psyr_2827	0.68	-0.8
3,401,518	-		Psyr_2827	0.76	-0.4
3,401,518	-		Psyr_2827	0.76	+0.9
3,401,518	-		Psyr_2827	0.76	+3.8
3,401,637	+		Psyr_2827	0.90	-1.0
3,401,637	+		Psyr_2827	0.90	-0.2
3,401,638	-				+0.4
3,401,767	+				-0.7
3,401,767	+				-0.8
3,401,767	+				-1.3
3,401,767	+				+1.4
3,401,767	+				-0.4
3,401,767	+				+0.3
3,401,767	+				-2.4
3,401,767	+				+0.4
3,401,767	+				+1.2
3,401,767	+				-3.0
3,401,768	-				-2.0
3,401,768	-				-2.7
3,401,768	-				+0.6
3,401,768	-				+1.5
3,401,768	-				+0.2
3,401,768	-				-0.3
3,401,768	-				+0.3
3,401,768	-				+0.6
3,401,768	-				-0.7
3,401,768	-				+1.6
3,401,768	-				+0.1
3,401,804	-				+0.6
3,402,001	-		Psyr_2828	0.11	+1.8
3,402,001	-		Psyr_2828	0.11	+1.2
3,402,001	-		Psyr_2828	0.11	-0.2
3,402,001	-		Psyr_2828	0.11	+0.9
3,402,189	+		Psyr_2828	0.20	+1.5
3,402,190	-		Psyr_2828	0.21	+0.9
3,402,381	-		Psyr_2828	0.30	-2.0
3,402,552	+		Psyr_2828	0.38	+0.2
3,402,552	+		Psyr_2828	0.38	-0.2
3,402,553	-		Psyr_2828	0.38	-0.5
3,402,847	+		Psyr_2828	0.53	-1.0
3,402,847	+		Psyr_2828	0.53	-1.3
3,402,847	+		Psyr_2828	0.53	-1.5
3,402,847	+		Psyr_2828	0.53	+0.1
3,402,847	+		Psyr_2828	0.53	-0.7
3,402,847	+		Psyr_2828	0.53	+0.1
3,402,847	+		Psyr_2828	0.53	+1.8
3,402,847	+		Psyr_2828	0.53	-0.2
3,402,847	+		Psyr_2828	0.53	+0.6
3,402,847	+		Psyr_2828	0.53	-0.7
3,402,847	+		Psyr_2828	0.53	-0.0
3,402,848	-		Psyr_2828	0.53	+2.6
3,403,064	-		Psyr_2828	0.63	-0.7
3,403,083	-		Psyr_2828	0.64	+1.9
3,403,083	-		Psyr_2828	0.64	+0.3
3,403,083	-		Psyr_2828	0.64	+0.6
3,403,123	+		Psyr_2828	0.66	+0.4
3,403,123	+		Psyr_2828	0.66	+0.1
3,403,252	-		Psyr_2828	0.72	+2.4
3,403,252	-		Psyr_2828	0.72	+0.9
3,403,252	-		Psyr_2828	0.72	+1.2
3,403,264	+		Psyr_2828	0.73	+2.7
3,403,264	+		Psyr_2828	0.73	+1.6
3,403,418	-		Psyr_2828	0.80	+0.6
3,403,496	+		Psyr_2828	0.84	+1.0
3,403,496	+		Psyr_2828	0.84	+1.1
3,403,497	-		Psyr_2828	0.84	-0.3
3,403,646	+				+0.3
3,403,647	-				-1.0
3,403,674	-				-0.9
3,403,825	+				-0.6
3,403,825	+				+1.3
3,403,825	+				-0.3
3,403,826	-				-0.4
3,403,826	-				+0.6
3,403,826	-				+0.6
3,403,830	+				-2.6
3,403,845	+				-0.2
3,403,846	-				+0.5
3,403,847	+				-0.5
3,403,847	+				-1.2
3,403,847	+				-0.6
3,403,847	+				+0.9
3,403,847	+				-1.1
3,403,848	-				-1.6
3,403,848	-				-0.8
3,403,848	-				+1.8
3,403,848	-				-0.9
3,403,848	-				+0.3
3,403,848	-				-0.9
3,403,848	-				+2.2
3,403,848	-				-2.2
3,403,848	-				-0.4
3,403,848	-				+0.0
3,403,848	-				-0.6
3,403,848	-				-0.9
3,403,848	-				-2.0
3,403,848	-				+0.0
3,403,856	-				-0.9
3,403,933	+				+0.1
3,403,934	-				+1.2
3,404,009	-				+0.2
3,404,020	+				-2.2
3,404,021	-				-0.7
3,404,030	+				-1.0
3,404,030	+				+0.2
3,404,030	+				-2.0
3,404,030	+				-0.7
3,404,030	+				-0.8
3,404,030	+				+1.4
3,404,030	+				+0.3
3,404,030	+				-0.7
3,404,031	-				-1.5
3,404,032	+				+3.1
3,404,032	+				-0.2
3,404,032	+				-0.7
3,404,032	+				-0.3
3,404,032	+				-0.4
3,404,032	+				-0.4
3,404,033	-				-2.7
3,404,033	-				+0.8
3,404,033	-				+1.2
3,404,033	-				+2.6
3,404,033	-				-0.2
3,404,033	-				+0.0
3,404,033	-				-0.6
3,404,033	-				+1.4
3,404,033	-				-0.4
3,404,033	-				+0.0
3,404,033	-				+0.6
3,404,044	+				+0.6
3,404,070	+				-0.5
3,404,070	+				+1.6
3,404,070	+				+1.3
3,404,071	-				-0.5
3,404,071	-				+1.3
3,404,147	+				+0.9
3,404,148	-				-0.1
3,404,213	+				-0.2
3,404,213	+				+1.7
3,404,213	+				+0.2
3,404,213	+				-0.7
3,404,214	-				+0.1
3,404,214	-				+1.4
3,404,214	-				+0.6
3,404,214	-				-0.4
3,404,255	-		Psyr_2829	0.19	+0.2
3,404,296	+		Psyr_2829	0.32	+0.5
3,404,296	+		Psyr_2829	0.32	-0.5
3,404,297	-		Psyr_2829	0.33	+2.2
3,404,297	-		Psyr_2829	0.33	-1.4
3,404,371	+		Psyr_2829	0.56	+0.5
3,404,653	-		Psyr_2830	0.23	-1.0
3,404,653	-		Psyr_2830	0.23	+0.2
3,404,668	-		Psyr_2830	0.25	+0.6
3,404,668	-		Psyr_2830	0.25	+1.0