Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2485

Experiment: KB with Fusaric 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Fusaric 250 ug/ml
2,886,085	+		Psyr_2484	0.71	+0.6
2,886,112	+		Psyr_2484	0.72	-0.3
2,886,112	+		Psyr_2484	0.72	-0.4
2,886,112	+		Psyr_2484	0.72	-1.5
2,886,112	+		Psyr_2484	0.72	-0.8
2,886,112	+		Psyr_2484	0.72	-0.2
2,886,112	+		Psyr_2484	0.72	-0.5
2,886,112	+		Psyr_2484	0.72	+0.1
2,886,112	+		Psyr_2484	0.72	-1.7
2,886,113	-		Psyr_2484	0.72	-1.0
2,886,113	-		Psyr_2484	0.72	+0.9
2,886,113	-		Psyr_2484	0.72	+0.7
2,886,113	-		Psyr_2484	0.72	+0.5
2,886,113	-		Psyr_2484	0.72	-0.2
2,886,113	-		Psyr_2484	0.72	-0.4
2,886,160	+		Psyr_2484	0.73	-1.0
2,886,485	-		Psyr_2484	0.84	+0.5
2,886,514	+		Psyr_2484	0.85	-1.6
2,886,515	-		Psyr_2484	0.85	-0.6
2,886,515	-		Psyr_2484	0.85	-0.7
2,886,515	-		Psyr_2484	0.85	+0.6
2,886,515	-		Psyr_2484	0.85	-2.0
2,886,515	-		Psyr_2484	0.85	+2.2
2,886,580	+		Psyr_2484	0.87	-2.6
2,886,580	+		Psyr_2484	0.87	-2.6
2,886,580	+		Psyr_2484	0.87	-1.2
2,886,580	+		Psyr_2484	0.87	+0.6
2,886,581	-		Psyr_2484	0.87	-1.0
2,886,581	-		Psyr_2484	0.87	+0.8
2,886,581	-		Psyr_2484	0.87	+0.6
2,886,581	-		Psyr_2484	0.87	-3.1
2,886,581	-		Psyr_2484	0.87	-0.6
2,886,581	-		Psyr_2484	0.87	+0.6
2,886,581	-		Psyr_2484	0.87	-0.2
2,886,581	-		Psyr_2484	0.87	-1.3
2,886,581	-		Psyr_2484	0.87	-2.4
2,886,581	-		Psyr_2484	0.87	-1.8
2,886,581	-		Psyr_2484	0.87	-1.2
2,886,584	+		Psyr_2484	0.87	-1.4
2,886,584	+		Psyr_2484	0.87	-0.4
2,886,584	+		Psyr_2484	0.87	+0.2
2,886,585	-		Psyr_2484	0.87	-1.2
2,886,585	-		Psyr_2484	0.87	-0.1
2,886,889	+				-2.2
2,886,890	-				+0.2
2,886,890	-				+1.6
2,886,907	+				-0.4
2,886,913	+				+0.4
2,886,987	-				-0.4
2,887,093	-				+0.9
2,887,198	-		Psyr_2485	0.14	-1.3
2,887,198	-		Psyr_2485	0.14	-0.3
2,887,263	+		Psyr_2485	0.19	-0.4
2,887,416	+		Psyr_2485	0.29	+0.1
2,887,417	-		Psyr_2485	0.29	+0.9
2,887,564	-		Psyr_2485	0.39	+0.6
2,887,564	-		Psyr_2485	0.39	-0.4
2,887,954	-		Psyr_2485	0.66	-0.2
2,887,994	+		Psyr_2485	0.69	-1.4
2,887,995	-		Psyr_2485	0.69	+1.6
2,888,000	+		Psyr_2485	0.69	-2.9
2,888,000	+		Psyr_2485	0.69	-1.9
2,888,000	+		Psyr_2485	0.69	+0.0
2,888,000	+		Psyr_2485	0.69	+1.1
2,888,001	-		Psyr_2485	0.69	-0.2
2,888,001	-		Psyr_2485	0.69	+0.0
2,888,119	-		Psyr_2485	0.77	-0.0
2,888,119	-		Psyr_2485	0.77	+0.1
2,888,181	+		Psyr_2485	0.82	-0.4
2,888,181	+		Psyr_2485	0.82	+0.3
2,888,181	+		Psyr_2485	0.82	-1.6
2,888,181	+		Psyr_2485	0.82	-2.4
2,888,181	+		Psyr_2485	0.82	+2.4
2,888,182	-		Psyr_2485	0.82	-0.3
2,888,182	-		Psyr_2485	0.82	+0.2
2,888,182	-		Psyr_2485	0.82	-1.4
2,888,182	-		Psyr_2485	0.82	+1.6
2,888,182	-		Psyr_2485	0.82	+1.6
2,888,182	-		Psyr_2485	0.82	-0.8
2,888,200	+		Psyr_2485	0.83	-0.2
2,888,201	-		Psyr_2485	0.83	+0.1
2,888,202	+		Psyr_2485	0.83	-0.1
2,888,277	+		Psyr_2485	0.88	+0.1
2,888,277	+		Psyr_2485	0.88	-0.5
2,888,277	+		Psyr_2485	0.88	-3.0
2,888,278	-		Psyr_2485	0.88	-1.2
2,888,448	+				-2.1
2,888,448	+				-0.2
2,888,452	+				-0.3
2,888,512	-				-2.9
2,888,565	-				-2.4
2,888,565	-				+0.6
2,888,619	+				+1.0
2,888,620	-				+0.6
2,888,635	+				-1.4
2,888,635	+				-0.9
2,888,636	-				-3.0
2,888,636	-				-1.8
2,888,636	-				-2.2
2,888,636	-				-0.6
2,888,636	-				-1.8
2,888,636	-				-1.7
2,888,636	-				+1.2
2,888,636	-				+0.6
2,888,636	-				+1.1
2,888,636	-				-2.4
2,888,820	-				+3.7
2,888,986	+		Psyr_2486	0.17	+0.2
2,888,986	+		Psyr_2486	0.17	-1.0
2,888,986	+		Psyr_2486	0.17	+0.8
2,889,009	+		Psyr_2486	0.18	+1.6
2,889,010	-		Psyr_2486	0.18	+1.7
2,889,130	+		Psyr_2486	0.24	+0.9
2,889,131	-		Psyr_2486	0.24	+1.0
2,889,187	+		Psyr_2486	0.27	-0.1
2,889,187	+		Psyr_2486	0.27	+2.4
2,889,188	-		Psyr_2486	0.27	-2.3