Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2025

Experiment: KB with Fusaric 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Fusaric 250 ug/ml
2,349,050	+				-0.3
2,349,050	+				+0.1
2,349,207	+		Psyr_2023	0.37	+0.9
2,349,270	+		Psyr_2023	0.55	-1.1
2,349,653	-		Psyr_2024	0.51	-0.8
2,349,714	+		Psyr_2024	0.64	-0.9
2,349,948	-				-0.8
2,349,948	-				+0.9
2,349,948	-				+0.9
2,350,078	-		Psyr_2025	0.31	-1.8
2,350,154	-		Psyr_2025	0.48	-0.9
2,350,177	+		Psyr_2025	0.53	-1.3
2,350,177	+		Psyr_2025	0.53	-0.9
2,350,177	+		Psyr_2025	0.53	-1.7
2,350,177	+		Psyr_2025	0.53	-1.9
2,350,178	-		Psyr_2025	0.54	+0.3
2,350,266	-		Psyr_2025	0.73	-1.1
2,350,266	-		Psyr_2025	0.73	-0.4
2,350,266	-		Psyr_2025	0.73	+0.9
2,350,266	-		Psyr_2025	0.73	+0.5
2,350,266	-		Psyr_2025	0.73	-0.1
2,350,283	+		Psyr_2025	0.77	+0.7
2,350,283	+		Psyr_2025	0.77	-1.7
2,350,283	+		Psyr_2025	0.77	-0.9
2,350,283	+		Psyr_2025	0.77	-0.3
2,350,283	+		Psyr_2025	0.77	-1.9
2,350,283	+		Psyr_2025	0.77	-1.9
2,350,284	-		Psyr_2025	0.77	-0.1
2,350,284	-		Psyr_2025	0.77	+0.0
2,350,284	-		Psyr_2025	0.77	-2.0
2,350,284	-		Psyr_2025	0.77	+0.2
2,350,395	+				-1.0
2,350,395	+				-0.3
2,350,395	+				-3.3
2,350,396	-				+0.2
2,350,456	+				+1.3
2,350,456	+				+0.9
2,350,456	+				-1.1
2,350,457	-				-0.4
2,350,457	-				+0.2
2,350,458	+				-1.0
2,350,458	+				+0.7
2,350,458	+				-1.3
2,350,459	-				-1.4
2,350,459	-				+0.9
2,350,459	-				+1.4
2,350,459	-				-2.4
2,350,460	+				+0.9
2,350,460	+				-2.3
2,350,460	+				-1.3
2,350,460	+				+1.2
2,350,460	+				+1.9
2,350,460	+				+1.4
2,350,460	+				+0.2
2,350,460	+				+0.8
2,350,460	+				-1.8
2,350,461	-				-0.1
2,350,461	-				-0.5
2,350,461	-				+1.4
2,350,461	-				+0.4
2,350,461	-				+0.1
2,350,461	-				-0.3
2,350,461	-				+1.3
2,350,461	-				+1.0
2,350,493	+				+0.7
2,350,494	-				+0.2
2,350,494	-				+0.5
2,350,495	+				+0.4
2,350,685	+				+0.5
2,350,685	+				+0.0
2,350,686	-				+3.0
2,350,686	-				+0.2
2,350,719	-		Psyr_2026	0.10	+2.0
2,351,114	+		Psyr_2026	0.59	-1.9
2,351,114	+		Psyr_2026	0.59	+0.7
2,351,190	-		Psyr_2026	0.69	-1.3
2,351,324	+		Psyr_2026	0.85	+0.1
2,351,325	-		Psyr_2026	0.85	+0.3