Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0742

Experiment: KB with Fusaric 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Fusaric 250 ug/ml
844,737	-		Psyr_0740	0.53	+0.4
844,884	+		Psyr_0740	0.89	+1.0
844,884	+		Psyr_0740	0.89	+1.3
844,884	+		Psyr_0740	0.89	+1.3
844,884	+		Psyr_0740	0.89	-2.0
844,884	+		Psyr_0740	0.89	-1.7
844,884	+		Psyr_0740	0.89	-0.2
844,884	+		Psyr_0740	0.89	+1.0
844,884	+		Psyr_0740	0.89	+2.0
844,884	+		Psyr_0740	0.89	+0.5
844,884	+		Psyr_0740	0.89	-1.4
844,884	+		Psyr_0740	0.89	+0.3
844,884	+		Psyr_0740	0.89	-2.8
844,885	-		Psyr_0740	0.89	-0.6
844,885	-		Psyr_0740	0.89	+0.4
844,885	-		Psyr_0740	0.89	+1.4
844,885	-		Psyr_0740	0.89	+2.4
844,885	-		Psyr_0740	0.89	+1.4
844,885	-		Psyr_0740	0.89	+0.5
844,885	-		Psyr_0740	0.89	-0.5
844,902	-				+1.3
844,948	+				-1.2
844,948	+				+0.1
844,948	+				-0.9
844,948	+				-2.6
844,949	-				-1.0
844,949	-				-0.5
844,949	-				-1.5
844,952	+				-0.8
844,952	+				-0.6
844,953	-				+0.3
844,953	-				-0.2
844,953	-				-0.5
844,953	-				+0.8
844,960	+				-0.2
844,961	-				-0.0
844,998	+				+0.0
844,998	+				-1.3
844,998	+				-1.3
844,998	+				+0.2
844,999	-				+0.2
844,999	-				+0.7
844,999	-				-0.5
844,999	-				-0.5
845,151	+		Psyr_0741	0.22	-0.4
845,151	+		Psyr_0741	0.22	+0.4
845,183	+		Psyr_0741	0.28	+0.2
845,183	+		Psyr_0741	0.28	-0.2
845,183	+		Psyr_0741	0.28	-0.5
845,183	+		Psyr_0741	0.28	+0.6
845,183	+		Psyr_0741	0.28	+3.3
845,238	+		Psyr_0741	0.36	-0.2
845,303	+		Psyr_0741	0.46	-0.5
845,303	+		Psyr_0741	0.46	-0.1
845,304	-		Psyr_0741	0.47	+0.6
845,311	+		Psyr_0741	0.48	+0.2
845,312	-		Psyr_0741	0.48	+0.2
845,312	-		Psyr_0741	0.48	-0.5
845,312	-		Psyr_0741	0.48	+1.3
845,352	+		Psyr_0741	0.54	-0.4
845,352	+		Psyr_0741	0.54	-2.2
845,352	+		Psyr_0741	0.54	-0.2
845,353	-		Psyr_0741	0.54	-0.1
845,435	+		Psyr_0741	0.67	-1.9
845,435	+		Psyr_0741	0.67	-1.2
845,435	+		Psyr_0741	0.67	-0.5
845,435	+		Psyr_0741	0.67	-0.6
845,435	+		Psyr_0741	0.67	+0.2
845,495	-		Psyr_0741	0.77	-2.2
845,495	-		Psyr_0741	0.77	+0.9
845,651	-				+1.8
845,651	-				-0.8
845,685	+				-0.6
845,686	-				-0.2
845,697	+				+0.5
845,697	+				-1.8
845,697	+				-1.0
845,698	-				-1.0
845,698	-				+2.7
845,698	-				+1.6
845,698	-				-1.0
845,698	-				-0.2
845,698	-				-0.1
845,698	-				-0.4
845,698	-				-0.2
845,701	+				+0.6
845,701	+				-0.5
845,701	+				+0.8
845,727	+				+1.4
845,821	+		Psyr_0742	0.15	-2.2
845,845	+		Psyr_0742	0.18	+0.3
845,845	+		Psyr_0742	0.18	-0.9
845,845	+		Psyr_0742	0.18	-0.8
845,846	-		Psyr_0742	0.18	-2.8
845,994	+		Psyr_0742	0.36	+0.9
846,032	+		Psyr_0742	0.40	-2.3
846,163	+		Psyr_0742	0.56	+0.1
846,163	+		Psyr_0742	0.56	+0.1
846,283	+		Psyr_0742	0.70	-2.0
846,283	+		Psyr_0742	0.70	-1.6
846,284	-		Psyr_0742	0.71	+0.9
846,284	-		Psyr_0742	0.71	-0.2
846,284	-		Psyr_0742	0.71	-1.0
846,284	-		Psyr_0742	0.71	-1.8
846,284	-		Psyr_0742	0.71	-0.8
846,284	-		Psyr_0742	0.71	-0.2
846,284	-		Psyr_0742	0.71	+0.4
846,284	-		Psyr_0742	0.71	+0.6
846,321	-		Psyr_0742	0.75	-0.2
846,321	-		Psyr_0742	0.75	-1.6
846,321	-		Psyr_0742	0.75	+1.6
846,327	+		Psyr_0742	0.76	-0.6
846,327	+		Psyr_0742	0.76	-0.8
846,327	+		Psyr_0742	0.76	+0.2
846,327	+		Psyr_0742	0.76	-1.7
846,327	+		Psyr_0742	0.76	+0.2
846,328	-		Psyr_0742	0.76	-0.2
846,328	-		Psyr_0742	0.76	+0.3
846,328	-		Psyr_0742	0.76	+1.0
846,328	-		Psyr_0742	0.76	-1.3
846,328	-		Psyr_0742	0.76	-1.5
846,328	-		Psyr_0742	0.76	-0.3
846,365	+		Psyr_0742	0.80	+0.9
846,365	+		Psyr_0742	0.80	+0.3
846,481	-				-3.0
846,518	+				-0.8
846,543	+				+1.4
846,545	+				+0.3
846,545	+				-0.1
846,545	+				-0.5
846,545	+				-1.8
846,545	+				+0.3
846,545	+				+0.5
846,545	+				-0.4
846,545	+				-0.9
846,545	+				+0.8
846,546	-				+0.7
846,546	-				-0.7
846,546	-				+0.1
846,546	-				+1.5
846,546	-				+2.6
846,558	-				-0.2
846,566	+				-0.4
846,593	+				+1.8
846,593	+				-1.2
846,593	+				+0.4
846,593	+				-0.8
846,593	+				-1.0
846,593	+				+0.1
846,593	+				+1.0
846,593	+				-1.3
846,594	-				-2.5
846,594	-				+0.2
846,594	-				+0.2
846,594	-				+0.2
846,594	-				-0.4
846,594	-				+0.1
846,594	-				-0.0
846,594	-				+0.8
846,594	-				+0.6
846,595	+				-0.2
846,595	+				+0.9
846,595	+				+1.8
846,596	-				+0.1
846,659	+				+0.4
846,741	-				+0.1
846,754	+				+0.5
846,754	+				-0.2
846,754	+				-0.4
846,754	+				+0.2
846,754	+				-2.9
846,754	+				+1.1
846,754	+				-1.6
846,754	+				-0.2
846,754	+				+0.6
846,754	+				-0.4
846,754	+				+1.0
846,755	-				-1.2
846,755	-				+0.8
846,755	-				+1.8
846,755	-				+0.8
846,755	-				+3.4
846,755	-				+0.5
846,755	-				+0.7
846,755	-				+0.4
846,755	-				-1.0
846,756	+				+0.1
846,756	+				-0.3
846,756	+				+0.5
846,756	+				-0.4
846,756	+				+2.1
846,756	+				-2.3
846,756	+				-1.9
846,756	+				-0.4
846,756	+				-0.7
846,756	+				-0.7
846,756	+				+0.1
846,756	+				-0.2
846,756	+				-0.0
846,756	+				+0.0
846,756	+				+0.0
846,756	+				-0.2
846,757	-				+1.8
846,757	-				+0.9
846,757	-				+0.5
846,757	-				-0.5
846,757	-				+0.9
846,757	-				-0.2
846,757	-				+1.1
846,757	-				+0.2
846,757	-				-1.3
846,757	-				-1.5
846,757	-				-2.6
846,757	-				+1.6
846,757	-				+0.0
846,759	+				+1.0
846,760	-				+0.7
846,760	-				-1.0
846,760	-				+0.2
846,774	+				+0.2
846,774	+				+0.3
846,774	+				-1.9
846,775	-				-0.5
846,775	-				+0.1
846,775	-				-1.4
846,933	-				-1.1
846,981	+				-0.3
846,981	+				+0.4
846,981	+				-0.2
846,981	+				-1.3
846,981	+				+0.7
846,982	-				+0.7
846,982	-				+1.1
846,982	-				-0.2
846,982	-				+0.5
846,982	-				-0.9
846,994	+				-1.4
846,994	+				-0.1
846,994	+				-1.7
846,994	+				+0.4
846,994	+				+0.6
846,994	+				+0.1
846,994	+				-1.0
846,995	-				+4.0
846,995	-				-2.3
847,232	+		Psyr_0743	0.64	-0.3
847,232	+		Psyr_0743	0.64	+0.6
847,232	+		Psyr_0743	0.64	+1.1
847,232	+		Psyr_0743	0.64	-1.1
847,233	-		Psyr_0743	0.65	-1.8
847,233	-		Psyr_0743	0.65	-2.1
847,233	-		Psyr_0743	0.65	-2.2
847,233	-		Psyr_0743	0.65	+1.1
847,233	-		Psyr_0743	0.65	-3.1
847,233	-		Psyr_0743	0.65	+0.7
847,235	+		Psyr_0743	0.65	-0.2
847,236	-		Psyr_0743	0.65	-0.4
847,236	-		Psyr_0743	0.65	+0.5
847,236	-		Psyr_0743	0.65	+1.6
847,370	+				-2.6
847,371	-				-1.4
847,454	-				-0.3
847,468	+				+1.8
847,468	+				+2.4
847,469	-				+0.6
847,469	-				-0.2
847,469	-				-0.9
847,469	-				+0.3