Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0652 and Psyr_0653 are separated by 432 nucleotides Psyr_0653 and Psyr_0654 overlap by 4 nucleotides
Psyr_0652: Psyr_0652 - Integrase, catalytic region, at 740,007 to 740,789
_0652
Psyr_0653: Psyr_0653 - transcriptional regulator, MerR family, at 741,222 to 741,620
_0653
Psyr_0654: Psyr_0654 - Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase, at 741,617 to 743,815
_0654
Position (kb) 741
742 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 740.299 kb on + strand, within Psyr_0652 at 740.794 kb on + strand at 740.794 kb on + strand at 740.794 kb on + strand at 740.794 kb on + strand at 740.794 kb on + strand at 740.794 kb on + strand at 740.794 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.852 kb on - strand at 740.923 kb on + strand at 740.923 kb on + strand at 740.923 kb on + strand at 740.924 kb on - strand at 740.924 kb on - strand at 740.924 kb on - strand at 740.924 kb on - strand at 740.924 kb on - strand at 740.924 kb on - strand at 740.924 kb on - strand at 740.927 kb on + strand at 740.927 kb on + strand at 740.927 kb on + strand at 740.927 kb on + strand at 740.927 kb on + strand at 740.928 kb on - strand at 740.967 kb on + strand at 740.967 kb on + strand at 740.967 kb on + strand at 740.967 kb on + strand at 740.967 kb on + strand at 740.967 kb on + strand at 740.967 kb on + strand at 740.968 kb on - strand at 740.968 kb on - strand at 741.107 kb on + strand at 741.107 kb on + strand at 741.107 kb on + strand at 741.107 kb on + strand at 741.107 kb on + strand at 741.107 kb on + strand at 741.107 kb on + strand at 741.505 kb on + strand, within Psyr_0653 at 741.506 kb on - strand, within Psyr_0653 at 741.506 kb on - strand, within Psyr_0653 at 741.506 kb on - strand, within Psyr_0653 at 741.563 kb on - strand, within Psyr_0653 at 741.563 kb on - strand, within Psyr_0653 at 741.565 kb on + strand, within Psyr_0653 at 741.566 kb on - strand, within Psyr_0653 at 741.729 kb on + strand at 741.729 kb on + strand at 741.765 kb on + strand at 741.766 kb on - strand at 741.766 kb on - strand at 741.766 kb on - strand at 741.766 kb on - strand at 742.046 kb on + strand, within Psyr_0654 at 742.046 kb on + strand, within Psyr_0654 at 742.046 kb on + strand, within Psyr_0654 at 742.046 kb on + strand, within Psyr_0654 at 742.046 kb on + strand, within Psyr_0654 at 742.047 kb on - strand, within Psyr_0654 at 742.047 kb on - strand, within Psyr_0654 at 742.183 kb on + strand, within Psyr_0654 at 742.184 kb on - strand at 742.184 kb on - strand, within Psyr_0654 at 742.184 kb on - strand, within Psyr_0654 at 742.184 kb on - strand, within Psyr_0654
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 740,299 + Psyr_0652 0.37 +0.7 740,794 + -1.5 740,794 + +1.1 740,794 + +0.8 740,794 + +0.7 740,794 + -0.5 740,794 + -1.0 740,794 + -0.0 740,796 + +0.8 740,796 + +0.1 740,796 + -0.5 740,796 + -1.3 740,796 + +1.4 740,796 + +1.1 740,796 + -0.6 740,796 + +0.3 740,852 - +0.9 740,923 + +0.3 740,923 + -1.0 740,923 + -0.2 740,924 - +0.8 740,924 - -0.3 740,924 - +0.8 740,924 - -3.5 740,924 - +0.6 740,924 - +0.2 740,924 - +0.8 740,927 + -0.2 740,927 + +2.4 740,927 + -0.1 740,927 + -0.0 740,927 + -2.0 740,928 - +2.4 740,967 + +1.3 740,967 + -2.0 740,967 + -0.1 740,967 + +0.3 740,967 + +0.1 740,967 + -1.2 740,967 + +1.1 740,968 - +0.3 740,968 - +0.3 741,107 + -0.3 741,107 + -0.4 741,107 + +1.5 741,107 + +0.1 741,107 + -0.3 741,107 + +0.3 741,107 + -0.4 741,505 + Psyr_0653 0.71 +0.6 741,506 - Psyr_0653 0.71 +0.8 741,506 - Psyr_0653 0.71 -0.7 741,506 - Psyr_0653 0.71 -1.2 741,563 - Psyr_0653 0.85 -0.4 741,563 - Psyr_0653 0.85 -0.3 741,565 + Psyr_0653 0.86 +0.2 741,566 - Psyr_0653 0.86 +1.1 741,729 + -0.3 741,729 + +1.1 741,765 + -0.4 741,766 - +0.3 741,766 - -0.4 741,766 - +0.2 741,766 - +1.1 742,046 + Psyr_0654 0.20 -1.4 742,046 + Psyr_0654 0.20 -2.2 742,046 + Psyr_0654 0.20 -0.3 742,046 + Psyr_0654 0.20 -0.3 742,046 + Psyr_0654 0.20 -3.2 742,047 - Psyr_0654 0.20 +1.1 742,047 - Psyr_0654 0.20 +2.3 742,183 + Psyr_0654 0.26 +1.0 742,184 - +2.4 742,184 - Psyr_0654 0.26 +0.5 742,184 - Psyr_0654 0.26 +0.1 742,184 - Psyr_0654 0.26 -0.2
Or see this region's nucleotide sequence