Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0575 and Psyr_0576 are separated by 270 nucleotides Psyr_0576 and Psyr_0577 are separated by 54 nucleotides
Psyr_0575: Psyr_0575 - protease FtsH subunit HflC, at 653,492 to 654,361
_0575
Psyr_0576: Psyr_0576 - ATP phosphoribosyltransferase regulatory subunit, putative, at 654,632 to 655,819
_0576
Psyr_0577: Psyr_0577 - Adenylosuccinate synthetase, at 655,874 to 657,166
_0577
Position (kb) 654
655
656 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 653.654 kb on + strand, within Psyr_0575 at 653.756 kb on + strand, within Psyr_0575 at 653.792 kb on + strand, within Psyr_0575 at 653.792 kb on + strand, within Psyr_0575 at 653.792 kb on + strand, within Psyr_0575 at 653.792 kb on + strand, within Psyr_0575 at 654.043 kb on + strand, within Psyr_0575 at 654.044 kb on - strand, within Psyr_0575 at 654.212 kb on + strand, within Psyr_0575 at 654.213 kb on - strand, within Psyr_0575 at 654.224 kb on + strand, within Psyr_0575 at 654.245 kb on + strand, within Psyr_0575 at 654.254 kb on + strand, within Psyr_0575 at 654.360 kb on - strand at 654.363 kb on + strand at 654.363 kb on + strand at 654.363 kb on + strand at 654.363 kb on + strand at 654.364 kb on - strand at 654.364 kb on - strand at 654.364 kb on - strand at 654.405 kb on + strand at 654.421 kb on + strand at 654.421 kb on + strand at 654.421 kb on + strand at 654.421 kb on + strand at 654.421 kb on + strand at 654.421 kb on + strand at 654.421 kb on + strand at 654.421 kb on + strand at 654.421 kb on + strand at 654.558 kb on + strand at 654.678 kb on + strand at 654.708 kb on + strand at 654.901 kb on + strand, within Psyr_0576 at 655.005 kb on + strand, within Psyr_0576 at 655.421 kb on + strand, within Psyr_0576 at 655.421 kb on + strand, within Psyr_0576 at 655.421 kb on + strand, within Psyr_0576 at 655.454 kb on + strand, within Psyr_0576
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 653,654 + Psyr_0575 0.19 +0.1 653,756 + Psyr_0575 0.30 -0.5 653,792 + Psyr_0575 0.34 -1.5 653,792 + Psyr_0575 0.34 +2.3 653,792 + Psyr_0575 0.34 +0.0 653,792 + Psyr_0575 0.34 +1.8 654,043 + Psyr_0575 0.63 -0.2 654,044 - Psyr_0575 0.63 +0.8 654,212 + Psyr_0575 0.83 -1.7 654,213 - Psyr_0575 0.83 -1.5 654,224 + Psyr_0575 0.84 -2.0 654,245 + Psyr_0575 0.87 -2.5 654,254 + Psyr_0575 0.88 -0.7 654,360 - -3.3 654,363 + +1.7 654,363 + +0.4 654,363 + -1.5 654,363 + +0.4 654,364 - -2.3 654,364 - -1.2 654,364 - -3.1 654,405 + -1.3 654,421 + +0.3 654,421 + +0.5 654,421 + +0.2 654,421 + -1.5 654,421 + -0.6 654,421 + -0.4 654,421 + -1.5 654,421 + -0.7 654,421 + -1.5 654,558 + +1.6 654,678 + -0.9 654,708 + -0.3 654,901 + Psyr_0576 0.23 -0.7 655,005 + Psyr_0576 0.31 -0.5 655,421 + Psyr_0576 0.66 +0.1 655,421 + Psyr_0576 0.66 -0.6 655,421 + Psyr_0576 0.66 -3.2 655,454 + Psyr_0576 0.69 -0.1
Or see this region's nucleotide sequence