Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4938 and Psyr_4939 overlap by 14 nucleotides Psyr_4939 and Psyr_4940 are separated by 547 nucleotides
Psyr_4938: Psyr_4938 - Helix-turn-helix, Fis-type, at 5,853,956 to 5,855,347
_4938
Psyr_4939: Psyr_4939 - conserved hypothetical protein, at 5,855,334 to 5,855,807
_4939
Psyr_4940: Psyr_4940 - 3'(2'),5'-bisphosphate nucleotidase, at 5,856,355 to 5,857,197
_4940
Position (kb) 5855
5856 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5854.694 kb on - strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.883 kb on + strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.884 kb on - strand, within Psyr_4938 at 5854.964 kb on + strand, within Psyr_4938 at 5854.965 kb on - strand, within Psyr_4938 at 5854.965 kb on - strand, within Psyr_4938 at 5855.044 kb on + strand, within Psyr_4938 at 5855.044 kb on + strand, within Psyr_4938 at 5855.044 kb on + strand, within Psyr_4938 at 5855.045 kb on - strand, within Psyr_4938 at 5855.045 kb on - strand, within Psyr_4938 at 5855.045 kb on - strand, within Psyr_4938 at 5855.045 kb on - strand, within Psyr_4938 at 5855.517 kb on + strand, within Psyr_4939 at 5855.517 kb on + strand, within Psyr_4939 at 5855.518 kb on - strand, within Psyr_4939 at 5855.591 kb on + strand, within Psyr_4939 at 5855.592 kb on - strand, within Psyr_4939 at 5855.592 kb on - strand, within Psyr_4939 at 5855.700 kb on + strand, within Psyr_4939 at 5855.701 kb on - strand, within Psyr_4939 at 5855.868 kb on - strand at 5855.899 kb on + strand at 5855.900 kb on - strand at 5855.900 kb on - strand at 5855.900 kb on - strand at 5855.951 kb on + strand at 5856.142 kb on + strand at 5856.142 kb on + strand at 5856.142 kb on + strand at 5856.142 kb on + strand at 5856.143 kb on - strand at 5856.143 kb on - strand at 5856.143 kb on - strand at 5856.143 kb on - strand at 5856.143 kb on - strand at 5856.143 kb on - strand at 5856.143 kb on - strand at 5856.149 kb on - strand at 5856.177 kb on - strand at 5856.220 kb on + strand at 5856.321 kb on + strand at 5856.321 kb on + strand at 5856.321 kb on + strand at 5856.321 kb on + strand at 5856.322 kb on - strand at 5856.797 kb on + strand, within Psyr_4940 at 5856.798 kb on - strand, within Psyr_4940 at 5856.798 kb on - strand, within Psyr_4940
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 5,854,694 - Psyr_4938 0.53 -0.3 5,854,883 + Psyr_4938 0.67 -1.6 5,854,883 + Psyr_4938 0.67 +0.3 5,854,883 + Psyr_4938 0.67 -0.8 5,854,883 + Psyr_4938 0.67 +1.0 5,854,883 + Psyr_4938 0.67 +0.3 5,854,883 + Psyr_4938 0.67 +1.5 5,854,883 + Psyr_4938 0.67 +0.3 5,854,883 + Psyr_4938 0.67 +0.3 5,854,883 + Psyr_4938 0.67 -0.1 5,854,884 - Psyr_4938 0.67 +0.5 5,854,884 - Psyr_4938 0.67 +1.3 5,854,884 - Psyr_4938 0.67 +1.9 5,854,884 - Psyr_4938 0.67 -0.7 5,854,884 - Psyr_4938 0.67 -0.7 5,854,884 - Psyr_4938 0.67 +0.3 5,854,884 - Psyr_4938 0.67 -0.6 5,854,964 + Psyr_4938 0.72 -1.2 5,854,965 - Psyr_4938 0.72 -0.2 5,854,965 - Psyr_4938 0.72 -0.6 5,855,044 + Psyr_4938 0.78 +0.1 5,855,044 + Psyr_4938 0.78 -0.2 5,855,044 + Psyr_4938 0.78 -0.5 5,855,045 - Psyr_4938 0.78 -0.1 5,855,045 - Psyr_4938 0.78 -0.7 5,855,045 - Psyr_4938 0.78 +0.9 5,855,045 - Psyr_4938 0.78 +1.6 5,855,517 + Psyr_4939 0.39 -1.0 5,855,517 + Psyr_4939 0.39 -2.4 5,855,518 - Psyr_4939 0.39 +0.1 5,855,591 + Psyr_4939 0.54 -0.7 5,855,592 - Psyr_4939 0.54 +0.1 5,855,592 - Psyr_4939 0.54 -0.5 5,855,700 + Psyr_4939 0.77 -1.5 5,855,701 - Psyr_4939 0.77 -0.2 5,855,868 - +0.6 5,855,899 + +0.3 5,855,900 - -0.1 5,855,900 - -0.3 5,855,900 - +0.3 5,855,951 + -0.6 5,856,142 + +0.2 5,856,142 + -0.8 5,856,142 + +0.8 5,856,142 + +1.0 5,856,143 - -0.1 5,856,143 - -0.5 5,856,143 - +0.5 5,856,143 - +0.7 5,856,143 - +0.1 5,856,143 - +0.1 5,856,143 - -1.6 5,856,149 - +0.7 5,856,177 - +0.8 5,856,220 + +0.6 5,856,321 + +0.7 5,856,321 + +0.5 5,856,321 + +0.3 5,856,321 + -0.2 5,856,322 - +0.1 5,856,797 + Psyr_4940 0.52 +1.2 5,856,798 - Psyr_4940 0.53 -0.9 5,856,798 - Psyr_4940 0.53 +0.5
Or see this region's nucleotide sequence