Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4830 and Psyr_4831 overlap by 4 nucleotides Psyr_4831 and Psyr_4832 are separated by 12 nucleotides Psyr_4832 and Psyr_4833 are separated by 54 nucleotides
Psyr_4830: Psyr_4830 - Binding-protein-dependent transport systems inner membrane component, at 5,732,872 to 5,733,723
_4830
Psyr_4831: Psyr_4831 - ABC transporter, at 5,733,720 to 5,734,550
_4831
Psyr_4832: Psyr_4832 - histidine ammonia-lyase, at 5,734,563 to 5,736,104
_4832
Psyr_4833: Psyr_4833 - histidine ammonia-lyase, at 5,736,159 to 5,737,706
_4833
Position (kb) 5734
5735
5736
5737 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5733.853 kb on + strand, within Psyr_4831 at 5733.854 kb on - strand, within Psyr_4831 at 5734.015 kb on - strand, within Psyr_4831 at 5734.187 kb on - strand, within Psyr_4831 at 5734.213 kb on - strand, within Psyr_4831 at 5734.249 kb on + strand, within Psyr_4831 at 5734.250 kb on - strand, within Psyr_4831 at 5734.250 kb on - strand, within Psyr_4831 at 5734.250 kb on - strand, within Psyr_4831 at 5734.250 kb on - strand, within Psyr_4831 at 5734.250 kb on - strand, within Psyr_4831 at 5734.472 kb on + strand at 5734.509 kb on + strand at 5734.510 kb on - strand at 5734.549 kb on - strand at 5734.893 kb on + strand, within Psyr_4832 at 5734.893 kb on + strand, within Psyr_4832 at 5734.893 kb on + strand, within Psyr_4832 at 5734.893 kb on + strand, within Psyr_4832 at 5734.893 kb on + strand, within Psyr_4832 at 5734.894 kb on - strand, within Psyr_4832 at 5734.894 kb on - strand, within Psyr_4832 at 5734.894 kb on - strand, within Psyr_4832 at 5734.999 kb on - strand, within Psyr_4832 at 5735.721 kb on + strand, within Psyr_4832 at 5735.721 kb on + strand, within Psyr_4832 at 5735.722 kb on - strand, within Psyr_4832 at 5735.784 kb on + strand, within Psyr_4832 at 5735.784 kb on + strand, within Psyr_4832 at 5735.784 kb on + strand, within Psyr_4832 at 5735.784 kb on + strand, within Psyr_4832 at 5735.784 kb on + strand, within Psyr_4832 at 5735.784 kb on + strand, within Psyr_4832 at 5735.784 kb on + strand, within Psyr_4832 at 5735.784 kb on + strand, within Psyr_4832 at 5735.784 kb on + strand, within Psyr_4832 at 5735.784 kb on + strand, within Psyr_4832 at 5735.784 kb on + strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.785 kb on - strand, within Psyr_4832 at 5735.988 kb on + strand at 5735.989 kb on - strand at 5736.100 kb on + strand at 5736.100 kb on + strand at 5736.100 kb on + strand at 5736.101 kb on - strand at 5736.101 kb on - strand at 5736.102 kb on + strand at 5736.102 kb on + strand at 5736.102 kb on + strand at 5736.102 kb on + strand at 5736.102 kb on + strand at 5736.103 kb on - strand at 5736.103 kb on - strand at 5736.103 kb on - strand at 5736.103 kb on - strand at 5736.103 kb on - strand at 5736.113 kb on + strand at 5736.113 kb on + strand at 5736.114 kb on - strand at 5736.139 kb on + strand at 5736.139 kb on + strand at 5736.139 kb on + strand at 5736.139 kb on + strand at 5736.139 kb on + strand at 5736.140 kb on - strand at 5736.140 kb on - strand at 5736.140 kb on - strand at 5736.140 kb on - strand at 5736.140 kb on - strand at 5736.140 kb on - strand at 5736.150 kb on - strand at 5736.150 kb on - strand at 5736.169 kb on + strand at 5736.169 kb on + strand at 5736.169 kb on + strand at 5736.169 kb on + strand at 5736.170 kb on - strand at 5736.170 kb on - strand at 5736.170 kb on - strand at 5736.231 kb on + strand at 5736.231 kb on + strand at 5736.231 kb on + strand at 5736.232 kb on - strand at 5736.232 kb on - strand at 5736.576 kb on - strand, within Psyr_4833 at 5736.576 kb on - strand, within Psyr_4833 at 5736.656 kb on + strand, within Psyr_4833 at 5736.657 kb on - strand, within Psyr_4833
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 5,733,853 + Psyr_4831 0.16 -0.5 5,733,854 - Psyr_4831 0.16 -0.4 5,734,015 - Psyr_4831 0.35 -0.9 5,734,187 - Psyr_4831 0.56 -0.2 5,734,213 - Psyr_4831 0.59 +0.8 5,734,249 + Psyr_4831 0.64 -1.4 5,734,250 - Psyr_4831 0.64 -1.8 5,734,250 - Psyr_4831 0.64 -2.0 5,734,250 - Psyr_4831 0.64 +1.6 5,734,250 - Psyr_4831 0.64 -1.0 5,734,250 - Psyr_4831 0.64 +0.7 5,734,472 + -1.8 5,734,509 + -0.8 5,734,510 - +0.7 5,734,549 - +1.9 5,734,893 + Psyr_4832 0.21 -0.5 5,734,893 + Psyr_4832 0.21 -1.5 5,734,893 + Psyr_4832 0.21 +1.6 5,734,893 + Psyr_4832 0.21 +1.1 5,734,893 + Psyr_4832 0.21 +0.8 5,734,894 - Psyr_4832 0.21 -0.7 5,734,894 - Psyr_4832 0.21 +0.8 5,734,894 - Psyr_4832 0.21 +0.4 5,734,999 - Psyr_4832 0.28 +0.0 5,735,721 + Psyr_4832 0.75 -0.7 5,735,721 + Psyr_4832 0.75 +0.2 5,735,722 - Psyr_4832 0.75 -0.1 5,735,784 + Psyr_4832 0.79 -0.1 5,735,784 + Psyr_4832 0.79 -0.4 5,735,784 + Psyr_4832 0.79 -3.1 5,735,784 + Psyr_4832 0.79 +0.3 5,735,784 + Psyr_4832 0.79 -0.0 5,735,784 + Psyr_4832 0.79 -0.8 5,735,784 + Psyr_4832 0.79 -1.3 5,735,784 + Psyr_4832 0.79 -1.5 5,735,784 + Psyr_4832 0.79 -0.6 5,735,784 + Psyr_4832 0.79 -1.9 5,735,784 + Psyr_4832 0.79 -0.3 5,735,785 - Psyr_4832 0.79 +0.4 5,735,785 - Psyr_4832 0.79 -0.8 5,735,785 - Psyr_4832 0.79 -0.4 5,735,785 - Psyr_4832 0.79 -0.7 5,735,785 - Psyr_4832 0.79 -0.2 5,735,785 - Psyr_4832 0.79 +0.4 5,735,785 - Psyr_4832 0.79 +0.0 5,735,785 - Psyr_4832 0.79 +0.1 5,735,785 - Psyr_4832 0.79 +1.1 5,735,785 - Psyr_4832 0.79 -0.0 5,735,785 - Psyr_4832 0.79 +2.0 5,735,785 - Psyr_4832 0.79 +0.5 5,735,785 - Psyr_4832 0.79 -0.2 5,735,785 - Psyr_4832 0.79 -1.3 5,735,785 - Psyr_4832 0.79 -0.4 5,735,785 - Psyr_4832 0.79 +1.4 5,735,785 - Psyr_4832 0.79 -2.8 5,735,785 - Psyr_4832 0.79 -0.3 5,735,785 - Psyr_4832 0.79 +0.5 5,735,785 - Psyr_4832 0.79 -0.5 5,735,785 - Psyr_4832 0.79 -0.7 5,735,988 + +0.5 5,735,989 - -0.4 5,736,100 + -2.3 5,736,100 + +0.6 5,736,100 + +0.2 5,736,101 - -0.3 5,736,101 - +2.2 5,736,102 + +1.3 5,736,102 + +0.6 5,736,102 + -0.1 5,736,102 + +0.0 5,736,102 + -1.0 5,736,103 - +1.2 5,736,103 - -0.6 5,736,103 - -0.6 5,736,103 - +1.0 5,736,103 - -0.1 5,736,113 + +0.8 5,736,113 + -0.0 5,736,114 - +1.7 5,736,139 + -0.6 5,736,139 + -0.4 5,736,139 + -2.8 5,736,139 + -0.8 5,736,139 + +0.5 5,736,140 - +0.6 5,736,140 - -0.4 5,736,140 - +0.2 5,736,140 - -1.5 5,736,140 - +1.0 5,736,140 - +1.8 5,736,150 - -0.6 5,736,150 - +1.1 5,736,169 + +1.8 5,736,169 + +0.7 5,736,169 + +0.9 5,736,169 + +0.6 5,736,170 - +0.5 5,736,170 - +1.2 5,736,170 - +0.5 5,736,231 + +0.9 5,736,231 + +0.0 5,736,231 + +0.2 5,736,232 - +2.0 5,736,232 - -0.2 5,736,576 - Psyr_4833 0.27 +0.4 5,736,576 - Psyr_4833 0.27 -1.9 5,736,656 + Psyr_4833 0.32 +2.3 5,736,657 - Psyr_4833 0.32 -0.5
Or see this region's nucleotide sequence