Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4796 and Psyr_4797 are separated by 40 nucleotides Psyr_4797 and Psyr_4798 are separated by 46 nucleotides
Psyr_4796: Psyr_4796 - DNA ligase (NAD+), at 5,685,673 to 5,687,358
_4796
Psyr_4797: Psyr_4797 - Protein of unknown function DUF1090, at 5,687,399 to 5,687,809
_4797
Psyr_4798: Psyr_4798 - conserved hypothetical protein, at 5,687,856 to 5,688,257
_4798
Position (kb) 5685
5686
5687
5688 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5684.680 kb on - strand at 5685.100 kb on - strand at 5685.197 kb on + strand at 5685.289 kb on - strand at 5685.555 kb on + strand at 5685.556 kb on - strand at 5685.556 kb on - strand at 5685.634 kb on + strand at 5685.681 kb on + strand at 5685.682 kb on - strand at 5685.824 kb on - strand at 5685.862 kb on + strand, within Psyr_4796 at 5685.863 kb on - strand, within Psyr_4796 at 5686.225 kb on + strand, within Psyr_4796 at 5686.245 kb on + strand, within Psyr_4796 at 5686.245 kb on + strand, within Psyr_4796 at 5686.246 kb on - strand, within Psyr_4796 at 5686.246 kb on - strand, within Psyr_4796 at 5686.432 kb on + strand, within Psyr_4796 at 5686.433 kb on - strand, within Psyr_4796 at 5686.433 kb on - strand, within Psyr_4796 at 5686.434 kb on + strand, within Psyr_4796 at 5686.434 kb on + strand, within Psyr_4796 at 5686.435 kb on - strand, within Psyr_4796 at 5686.453 kb on + strand, within Psyr_4796 at 5686.453 kb on + strand, within Psyr_4796 at 5686.453 kb on + strand, within Psyr_4796 at 5686.707 kb on + strand, within Psyr_4796 at 5686.707 kb on + strand, within Psyr_4796 at 5687.005 kb on - strand, within Psyr_4796 at 5687.307 kb on - strand at 5687.307 kb on - strand at 5687.307 kb on - strand at 5687.352 kb on + strand at 5687.352 kb on + strand at 5687.352 kb on + strand at 5687.353 kb on - strand at 5687.353 kb on - strand at 5687.353 kb on - strand at 5687.353 kb on - strand at 5687.353 kb on - strand at 5687.381 kb on + strand at 5687.382 kb on - strand at 5687.382 kb on - strand at 5687.399 kb on - strand at 5687.458 kb on - strand, within Psyr_4797 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.968 kb on + strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5687.969 kb on - strand, within Psyr_4798 at 5688.016 kb on - strand, within Psyr_4798 at 5688.209 kb on + strand, within Psyr_4798 at 5688.210 kb on - strand, within Psyr_4798 at 5688.210 kb on - strand, within Psyr_4798 at 5688.257 kb on + strand at 5688.257 kb on + strand at 5688.257 kb on + strand at 5688.257 kb on + strand at 5688.257 kb on + strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.258 kb on - strand at 5688.269 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.271 kb on + strand at 5688.272 kb on - strand at 5688.272 kb on - strand at 5688.272 kb on - strand at 5688.272 kb on - strand at 5688.272 kb on - strand at 5688.272 kb on - strand at 5688.318 kb on + strand at 5688.318 kb on + strand at 5688.318 kb on + strand at 5688.318 kb on + strand at 5688.319 kb on - strand at 5688.319 kb on - strand at 5688.319 kb on - strand at 5688.319 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 5,684,680 - +1.2 5,685,100 - +2.6 5,685,197 + -1.4 5,685,289 - +1.4 5,685,555 + -0.8 5,685,556 - -0.1 5,685,556 - +0.3 5,685,634 + +0.6 5,685,681 + -1.0 5,685,682 - +0.6 5,685,824 - +1.9 5,685,862 + Psyr_4796 0.11 +1.2 5,685,863 - Psyr_4796 0.11 +1.6 5,686,225 + Psyr_4796 0.33 +1.2 5,686,245 + Psyr_4796 0.34 +0.6 5,686,245 + Psyr_4796 0.34 +1.0 5,686,246 - Psyr_4796 0.34 +1.8 5,686,246 - Psyr_4796 0.34 -2.3 5,686,432 + Psyr_4796 0.45 +2.4 5,686,433 - Psyr_4796 0.45 -0.1 5,686,433 - Psyr_4796 0.45 -0.2 5,686,434 + Psyr_4796 0.45 +0.9 5,686,434 + Psyr_4796 0.45 -0.0 5,686,435 - Psyr_4796 0.45 +1.2 5,686,453 + Psyr_4796 0.46 -0.3 5,686,453 + Psyr_4796 0.46 +0.0 5,686,453 + Psyr_4796 0.46 +0.8 5,686,707 + Psyr_4796 0.61 +0.3 5,686,707 + Psyr_4796 0.61 +0.3 5,687,005 - Psyr_4796 0.79 -0.2 5,687,307 - -1.6 5,687,307 - -1.4 5,687,307 - -0.6 5,687,352 + +0.9 5,687,352 + -0.5 5,687,352 + +0.8 5,687,353 - +0.5 5,687,353 - +0.7 5,687,353 - +0.1 5,687,353 - +0.6 5,687,353 - +0.8 5,687,381 + +0.9 5,687,382 - +0.5 5,687,382 - -0.7 5,687,399 - -0.6 5,687,458 - Psyr_4797 0.14 -1.4 5,687,968 + Psyr_4798 0.28 -2.5 5,687,968 + Psyr_4798 0.28 +0.7 5,687,968 + Psyr_4798 0.28 +0.3 5,687,968 + Psyr_4798 0.28 -2.0 5,687,968 + Psyr_4798 0.28 +0.3 5,687,968 + Psyr_4798 0.28 -1.5 5,687,968 + Psyr_4798 0.28 -1.6 5,687,968 + Psyr_4798 0.28 -1.1 5,687,968 + Psyr_4798 0.28 -2.3 5,687,968 + Psyr_4798 0.28 -2.0 5,687,968 + Psyr_4798 0.28 -2.6 5,687,968 + Psyr_4798 0.28 +0.2 5,687,968 + Psyr_4798 0.28 -0.8 5,687,968 + Psyr_4798 0.28 +1.0 5,687,968 + Psyr_4798 0.28 -1.2 5,687,968 + Psyr_4798 0.28 +0.6 5,687,968 + Psyr_4798 0.28 +0.2 5,687,969 - Psyr_4798 0.28 -1.0 5,687,969 - Psyr_4798 0.28 -0.8 5,687,969 - Psyr_4798 0.28 +0.2 5,687,969 - Psyr_4798 0.28 -0.2 5,687,969 - Psyr_4798 0.28 +1.8 5,687,969 - Psyr_4798 0.28 +0.8 5,687,969 - Psyr_4798 0.28 +0.2 5,687,969 - Psyr_4798 0.28 -0.9 5,687,969 - Psyr_4798 0.28 -0.8 5,688,016 - Psyr_4798 0.40 -0.1 5,688,209 + Psyr_4798 0.88 +0.0 5,688,210 - Psyr_4798 0.88 -0.7 5,688,210 - Psyr_4798 0.88 -0.8 5,688,257 + +0.2 5,688,257 + -0.0 5,688,257 + -0.2 5,688,257 + -0.2 5,688,257 + +1.9 5,688,258 - -0.0 5,688,258 - +0.5 5,688,258 - +0.6 5,688,258 - -0.1 5,688,258 - +2.0 5,688,258 - -0.0 5,688,258 - +0.4 5,688,258 - +0.3 5,688,258 - -0.3 5,688,269 + -1.0 5,688,271 + -0.2 5,688,271 + +2.1 5,688,271 + -0.9 5,688,271 + +0.2 5,688,271 + -2.2 5,688,271 + +1.3 5,688,271 + -1.8 5,688,271 + +0.4 5,688,271 + -0.3 5,688,272 - -0.2 5,688,272 - -0.8 5,688,272 - -1.8 5,688,272 - +0.1 5,688,272 - +0.6 5,688,272 - +0.9 5,688,318 + -1.6 5,688,318 + +1.9 5,688,318 + -0.5 5,688,318 + -0.1 5,688,319 - +0.0 5,688,319 - +2.4 5,688,319 - +1.1 5,688,319 - -1.5
Or see this region's nucleotide sequence