Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4628 and Psyr_4629 overlap by 1 nucleotides Psyr_4629 and Psyr_4630 are separated by 23 nucleotides Psyr_4630 and Psyr_4631 are separated by 287 nucleotides
Psyr_4628: Psyr_4628 - Protein of unknown function DUF525, at 5,488,538 to 5,488,939
_4628
Psyr_4629: Psyr_4629 - Bis(5'-nucleosyl)-tetraphosphatase (symmetrical), at 5,488,939 to 5,489,814
_4629
Psyr_4630: Psyr_4630 - thiosulfate sulfurtransferase, at 5,489,838 to 5,490,158
_4630
Psyr_4631: Psyr_4631 - PrkA serine kinase, at 5,490,446 to 5,492,368
_4631
Position (kb) 5489
5490
5491 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5488.949 kb on - strand at 5489.752 kb on - strand at 5489.855 kb on + strand at 5489.855 kb on + strand at 5490.008 kb on + strand, within Psyr_4630 at 5490.063 kb on + strand, within Psyr_4630 at 5490.063 kb on + strand, within Psyr_4630 at 5490.064 kb on - strand, within Psyr_4630 at 5490.093 kb on + strand, within Psyr_4630 at 5490.093 kb on + strand, within Psyr_4630 at 5490.093 kb on + strand, within Psyr_4630 at 5490.093 kb on + strand, within Psyr_4630 at 5490.094 kb on - strand, within Psyr_4630 at 5490.094 kb on - strand, within Psyr_4630 at 5490.094 kb on - strand, within Psyr_4630 at 5490.094 kb on - strand, within Psyr_4630 at 5490.094 kb on - strand, within Psyr_4630 at 5490.094 kb on - strand, within Psyr_4630 at 5490.094 kb on - strand, within Psyr_4630 at 5490.160 kb on - strand at 5490.172 kb on + strand at 5490.173 kb on - strand at 5490.194 kb on + strand at 5490.194 kb on + strand at 5490.195 kb on - strand at 5490.195 kb on - strand at 5490.273 kb on + strand at 5490.273 kb on + strand at 5490.273 kb on + strand at 5490.273 kb on + strand at 5490.273 kb on + strand at 5490.274 kb on - strand at 5490.274 kb on - strand at 5490.274 kb on - strand at 5490.274 kb on - strand at 5490.279 kb on + strand at 5490.336 kb on + strand at 5490.337 kb on - strand at 5490.340 kb on + strand at 5490.340 kb on + strand at 5490.341 kb on - strand at 5490.341 kb on - strand at 5490.346 kb on + strand at 5490.347 kb on - strand at 5490.347 kb on - strand at 5490.375 kb on + strand at 5490.376 kb on - strand at 5490.376 kb on - strand at 5490.376 kb on - strand at 5490.378 kb on + strand at 5490.378 kb on + strand at 5490.379 kb on - strand at 5490.379 kb on - strand at 5490.379 kb on - strand at 5490.379 kb on - strand at 5490.381 kb on + strand at 5490.381 kb on + strand at 5490.381 kb on + strand at 5490.382 kb on - strand at 5490.382 kb on - strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.451 kb on + strand at 5490.452 kb on - strand at 5490.452 kb on - strand at 5490.452 kb on - strand at 5490.452 kb on - strand at 5490.452 kb on - strand at 5490.453 kb on + strand at 5490.453 kb on + strand at 5490.453 kb on + strand at 5490.453 kb on + strand at 5490.454 kb on - strand at 5490.454 kb on - strand at 5490.454 kb on - strand at 5490.454 kb on - strand at 5490.515 kb on + strand at 5490.515 kb on + strand at 5490.515 kb on + strand at 5490.515 kb on + strand at 5490.515 kb on + strand at 5490.515 kb on + strand at 5490.516 kb on - strand at 5490.516 kb on - strand at 5490.548 kb on + strand at 5490.549 kb on - strand at 5490.605 kb on - strand at 5490.651 kb on + strand, within Psyr_4631 at 5490.651 kb on + strand, within Psyr_4631 at 5490.717 kb on - strand, within Psyr_4631 at 5490.717 kb on - strand, within Psyr_4631 at 5490.764 kb on + strand, within Psyr_4631 at 5490.764 kb on + strand, within Psyr_4631 at 5490.764 kb on + strand, within Psyr_4631 at 5490.764 kb on + strand, within Psyr_4631 at 5490.764 kb on + strand, within Psyr_4631 at 5490.765 kb on - strand, within Psyr_4631 at 5490.765 kb on - strand, within Psyr_4631 at 5490.765 kb on - strand, within Psyr_4631 at 5490.843 kb on - strand, within Psyr_4631 at 5490.843 kb on - strand, within Psyr_4631 at 5490.843 kb on - strand, within Psyr_4631 at 5490.843 kb on - strand, within Psyr_4631 at 5490.944 kb on + strand, within Psyr_4631 at 5491.032 kb on - strand, within Psyr_4631
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 5,488,949 - +0.7 5,489,752 - -1.8 5,489,855 + -0.1 5,489,855 + +1.3 5,490,008 + Psyr_4630 0.53 -0.7 5,490,063 + Psyr_4630 0.70 -1.0 5,490,063 + Psyr_4630 0.70 -0.6 5,490,064 - Psyr_4630 0.70 +0.5 5,490,093 + Psyr_4630 0.79 -0.6 5,490,093 + Psyr_4630 0.79 +1.1 5,490,093 + Psyr_4630 0.79 -2.1 5,490,093 + Psyr_4630 0.79 +0.7 5,490,094 - Psyr_4630 0.80 -0.1 5,490,094 - Psyr_4630 0.80 -1.4 5,490,094 - Psyr_4630 0.80 -1.7 5,490,094 - Psyr_4630 0.80 -0.4 5,490,094 - Psyr_4630 0.80 +0.1 5,490,094 - Psyr_4630 0.80 +0.1 5,490,094 - Psyr_4630 0.80 +0.5 5,490,160 - +0.7 5,490,172 + +0.1 5,490,173 - +0.2 5,490,194 + +0.7 5,490,194 + -0.5 5,490,195 - -0.9 5,490,195 - +0.5 5,490,273 + +1.9 5,490,273 + +3.1 5,490,273 + +2.3 5,490,273 + +1.8 5,490,273 + +0.1 5,490,274 - -0.1 5,490,274 - -0.1 5,490,274 - +1.2 5,490,274 - +0.6 5,490,279 + -0.8 5,490,336 + +0.7 5,490,337 - +0.7 5,490,340 + +1.3 5,490,340 + +1.7 5,490,341 - -0.2 5,490,341 - -0.7 5,490,346 + +0.1 5,490,347 - -1.6 5,490,347 - +0.2 5,490,375 + -0.1 5,490,376 - -0.5 5,490,376 - +0.7 5,490,376 - +0.1 5,490,378 + +0.4 5,490,378 + +0.2 5,490,379 - +1.7 5,490,379 - +0.5 5,490,379 - -0.1 5,490,379 - +0.1 5,490,381 + +1.7 5,490,381 + -0.7 5,490,381 + -0.7 5,490,382 - +0.7 5,490,382 - -0.2 5,490,451 + +0.3 5,490,451 + -0.8 5,490,451 + +0.6 5,490,451 + +1.2 5,490,451 + +0.7 5,490,451 + +0.7 5,490,451 + -0.3 5,490,451 + -2.1 5,490,451 + -1.1 5,490,451 + -1.8 5,490,451 + -1.0 5,490,451 + -0.1 5,490,451 + -0.2 5,490,451 + +0.5 5,490,452 - -0.8 5,490,452 - +0.4 5,490,452 - +0.0 5,490,452 - +0.2 5,490,452 - +0.6 5,490,453 + -0.6 5,490,453 + -0.7 5,490,453 + -0.6 5,490,453 + -1.1 5,490,454 - -0.6 5,490,454 - -1.5 5,490,454 - -2.5 5,490,454 - -0.8 5,490,515 + +1.3 5,490,515 + +0.4 5,490,515 + -0.8 5,490,515 + +0.6 5,490,515 + -0.3 5,490,515 + -0.2 5,490,516 - +0.2 5,490,516 - -1.3 5,490,548 + -0.3 5,490,549 - +0.6 5,490,605 - +0.7 5,490,651 + Psyr_4631 0.11 -0.3 5,490,651 + Psyr_4631 0.11 -2.8 5,490,717 - Psyr_4631 0.14 +0.0 5,490,717 - Psyr_4631 0.14 +1.1 5,490,764 + Psyr_4631 0.17 -0.5 5,490,764 + Psyr_4631 0.17 +1.0 5,490,764 + Psyr_4631 0.17 +0.5 5,490,764 + Psyr_4631 0.17 -0.8 5,490,764 + Psyr_4631 0.17 -1.7 5,490,765 - Psyr_4631 0.17 +1.7 5,490,765 - Psyr_4631 0.17 -1.1 5,490,765 - Psyr_4631 0.17 -0.3 5,490,843 - Psyr_4631 0.21 +0.9 5,490,843 - Psyr_4631 0.21 +1.0 5,490,843 - Psyr_4631 0.21 +0.0 5,490,843 - Psyr_4631 0.21 -1.1 5,490,944 + Psyr_4631 0.26 -0.5 5,491,032 - Psyr_4631 0.30 -0.8
Or see this region's nucleotide sequence