Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4281 and Psyr_4282 are separated by 3 nucleotides Psyr_4282 and Psyr_4283 are separated by 474 nucleotides
Psyr_4281: Psyr_4281 - cytochrome bd quinol oxidase subunit 2 apoprotein, at 5,104,595 to 5,105,602
_4281
Psyr_4282: Psyr_4282 - cytochrome bd quinol oxidase subunit 1 apoprotein, at 5,105,606 to 5,107,045
_4282
Psyr_4283: Psyr_4283 - xanthine dehydrogenase, molybdenum binding subunit apoprotein, at 5,107,520 to 5,109,721
_4283
Position (kb) 5105
5106
5107
5108 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5104.638 kb on + strand at 5104.638 kb on + strand at 5104.638 kb on + strand at 5104.638 kb on + strand at 5104.638 kb on + strand at 5104.638 kb on + strand at 5104.638 kb on + strand at 5104.638 kb on + strand at 5104.639 kb on - strand at 5104.639 kb on - strand at 5104.639 kb on - strand at 5104.639 kb on - strand at 5104.639 kb on - strand at 5104.639 kb on - strand at 5104.639 kb on - strand at 5104.639 kb on - strand at 5104.641 kb on + strand at 5104.641 kb on + strand at 5104.641 kb on + strand at 5104.641 kb on + strand at 5104.641 kb on + strand at 5104.641 kb on + strand at 5104.642 kb on - strand at 5104.642 kb on - strand at 5104.642 kb on - strand at 5104.820 kb on + strand, within Psyr_4281 at 5104.820 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.869 kb on + strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5104.870 kb on - strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.193 kb on + strand, within Psyr_4281 at 5105.194 kb on - strand, within Psyr_4281 at 5105.194 kb on - strand, within Psyr_4281 at 5105.194 kb on - strand, within Psyr_4281 at 5105.194 kb on - strand, within Psyr_4281 at 5105.194 kb on - strand, within Psyr_4281 at 5105.194 kb on - strand, within Psyr_4281 at 5105.194 kb on - strand, within Psyr_4281 at 5105.194 kb on - strand, within Psyr_4281 at 5105.194 kb on - strand, within Psyr_4281 at 5105.194 kb on - strand, within Psyr_4281 at 5105.194 kb on - strand, within Psyr_4281 at 5105.352 kb on + strand, within Psyr_4281 at 5105.377 kb on - strand, within Psyr_4281 at 5105.544 kb on + strand at 5105.544 kb on + strand at 5105.544 kb on + strand at 5105.544 kb on + strand at 5105.544 kb on + strand at 5105.544 kb on + strand at 5105.544 kb on + strand at 5105.544 kb on + strand at 5105.544 kb on + strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.545 kb on - strand at 5105.607 kb on + strand at 5105.607 kb on + strand at 5105.607 kb on + strand at 5105.608 kb on - strand at 5105.728 kb on - strand at 5105.728 kb on - strand at 5105.728 kb on - strand at 5105.728 kb on - strand at 5105.763 kb on + strand, within Psyr_4282 at 5105.763 kb on + strand, within Psyr_4282 at 5105.763 kb on + strand, within Psyr_4282 at 5105.763 kb on + strand, within Psyr_4282 at 5105.763 kb on + strand, within Psyr_4282 at 5105.764 kb on - strand, within Psyr_4282 at 5105.764 kb on - strand, within Psyr_4282 at 5105.764 kb on - strand, within Psyr_4282 at 5105.794 kb on - strand, within Psyr_4282 at 5105.877 kb on + strand, within Psyr_4282 at 5105.967 kb on + strand, within Psyr_4282 at 5105.968 kb on - strand, within Psyr_4282 at 5105.989 kb on - strand, within Psyr_4282 at 5106.094 kb on + strand, within Psyr_4282 at 5106.095 kb on - strand, within Psyr_4282 at 5106.192 kb on + strand, within Psyr_4282 at 5106.193 kb on - strand, within Psyr_4282 at 5106.193 kb on - strand, within Psyr_4282 at 5106.199 kb on + strand, within Psyr_4282 at 5106.200 kb on - strand, within Psyr_4282 at 5106.200 kb on - strand, within Psyr_4282 at 5106.747 kb on + strand, within Psyr_4282 at 5106.747 kb on + strand, within Psyr_4282 at 5106.748 kb on - strand, within Psyr_4282 at 5106.748 kb on - strand, within Psyr_4282 at 5106.748 kb on - strand, within Psyr_4282 at 5106.748 kb on - strand, within Psyr_4282 at 5106.885 kb on + strand, within Psyr_4282 at 5106.885 kb on + strand, within Psyr_4282 at 5106.886 kb on - strand, within Psyr_4282 at 5106.897 kb on + strand, within Psyr_4282 at 5106.945 kb on + strand at 5106.945 kb on + strand at 5106.946 kb on - strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.025 kb on + strand at 5107.026 kb on - strand at 5107.026 kb on - strand at 5107.026 kb on - strand at 5107.026 kb on - strand at 5107.026 kb on - strand at 5107.026 kb on - strand at 5107.026 kb on - strand at 5107.026 kb on - strand at 5107.026 kb on - strand at 5107.026 kb on - strand at 5107.026 kb on - strand at 5107.026 kb on - strand at 5107.028 kb on - strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.045 kb on + strand at 5107.046 kb on - strand at 5107.046 kb on - strand at 5107.046 kb on - strand at 5107.046 kb on - strand at 5107.046 kb on - strand at 5107.046 kb on - strand at 5107.046 kb on - strand at 5107.046 kb on - strand at 5107.046 kb on - strand at 5107.046 kb on - strand at 5107.046 kb on - strand at 5107.046 kb on - strand at 5107.121 kb on + strand at 5107.121 kb on + strand at 5107.121 kb on + strand at 5107.121 kb on + strand at 5107.121 kb on + strand at 5107.121 kb on + strand at 5107.122 kb on - strand at 5107.122 kb on - strand at 5107.122 kb on - strand at 5107.122 kb on - strand at 5107.122 kb on - strand at 5107.122 kb on - strand at 5107.122 kb on - strand at 5107.131 kb on + strand at 5107.195 kb on + strand at 5107.196 kb on - strand at 5107.196 kb on - strand at 5107.196 kb on - strand at 5107.237 kb on + strand at 5107.252 kb on + strand at 5107.298 kb on + strand at 5107.378 kb on + strand at 5107.531 kb on + strand at 5107.558 kb on + strand at 5107.578 kb on + strand at 5107.578 kb on + strand at 5107.578 kb on + strand at 5107.579 kb on - strand at 5107.579 kb on - strand at 5107.579 kb on - strand at 5107.579 kb on - strand at 5107.945 kb on + strand, within Psyr_4283 at 5107.945 kb on + strand, within Psyr_4283 at 5107.946 kb on - strand, within Psyr_4283 at 5107.956 kb on + strand, within Psyr_4283
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 5,104,638 + -0.9 5,104,638 + -4.0 5,104,638 + -2.9 5,104,638 + -3.2 5,104,638 + -2.2 5,104,638 + -0.6 5,104,638 + -3.5 5,104,638 + -2.6 5,104,639 - -1.4 5,104,639 - -2.2 5,104,639 - -1.9 5,104,639 - +1.0 5,104,639 - -1.0 5,104,639 - -0.9 5,104,639 - -1.9 5,104,639 - -2.3 5,104,641 + -0.7 5,104,641 + +1.7 5,104,641 + -2.0 5,104,641 + -2.2 5,104,641 + -0.6 5,104,641 + -1.6 5,104,642 - -0.9 5,104,642 - -0.3 5,104,642 - -1.9 5,104,820 + Psyr_4281 0.22 -3.2 5,104,820 + Psyr_4281 0.22 -1.5 5,104,869 + Psyr_4281 0.27 -1.5 5,104,869 + Psyr_4281 0.27 -0.2 5,104,869 + Psyr_4281 0.27 -1.4 5,104,869 + Psyr_4281 0.27 -1.6 5,104,869 + Psyr_4281 0.27 -1.3 5,104,869 + Psyr_4281 0.27 -2.3 5,104,869 + Psyr_4281 0.27 -2.0 5,104,869 + Psyr_4281 0.27 -0.2 5,104,869 + Psyr_4281 0.27 -2.9 5,104,869 + Psyr_4281 0.27 -0.3 5,104,869 + Psyr_4281 0.27 -0.9 5,104,869 + Psyr_4281 0.27 +0.2 5,104,869 + Psyr_4281 0.27 -1.9 5,104,869 + Psyr_4281 0.27 -2.9 5,104,869 + Psyr_4281 0.27 -2.3 5,104,869 + Psyr_4281 0.27 -0.9 5,104,870 - Psyr_4281 0.27 +0.9 5,104,870 - Psyr_4281 0.27 +0.2 5,104,870 - Psyr_4281 0.27 -0.9 5,104,870 - Psyr_4281 0.27 -2.6 5,104,870 - Psyr_4281 0.27 -0.7 5,104,870 - Psyr_4281 0.27 -1.5 5,104,870 - Psyr_4281 0.27 -2.1 5,104,870 - Psyr_4281 0.27 -1.6 5,104,870 - Psyr_4281 0.27 -1.0 5,104,870 - Psyr_4281 0.27 -2.2 5,104,870 - Psyr_4281 0.27 -0.3 5,104,870 - Psyr_4281 0.27 -2.6 5,104,870 - Psyr_4281 0.27 -1.6 5,104,870 - Psyr_4281 0.27 -1.5 5,104,870 - Psyr_4281 0.27 -1.9 5,104,870 - Psyr_4281 0.27 -2.3 5,104,870 - Psyr_4281 0.27 -0.7 5,104,870 - Psyr_4281 0.27 -2.5 5,104,870 - Psyr_4281 0.27 +0.3 5,104,870 - Psyr_4281 0.27 -2.4 5,104,870 - Psyr_4281 0.27 -2.5 5,104,870 - Psyr_4281 0.27 -1.2 5,104,870 - Psyr_4281 0.27 -1.4 5,104,870 - Psyr_4281 0.27 -1.8 5,104,870 - Psyr_4281 0.27 -2.1 5,104,870 - Psyr_4281 0.27 +0.5 5,104,870 - Psyr_4281 0.27 -4.1 5,105,193 + Psyr_4281 0.59 -0.3 5,105,193 + Psyr_4281 0.59 -3.3 5,105,193 + Psyr_4281 0.59 -0.1 5,105,193 + Psyr_4281 0.59 +1.0 5,105,193 + Psyr_4281 0.59 -2.8 5,105,193 + Psyr_4281 0.59 -1.8 5,105,193 + Psyr_4281 0.59 -3.0 5,105,193 + Psyr_4281 0.59 -1.5 5,105,193 + Psyr_4281 0.59 -3.8 5,105,193 + Psyr_4281 0.59 -0.3 5,105,193 + Psyr_4281 0.59 -1.2 5,105,193 + Psyr_4281 0.59 -1.2 5,105,193 + Psyr_4281 0.59 -1.4 5,105,194 - Psyr_4281 0.59 -2.4 5,105,194 - Psyr_4281 0.59 -2.8 5,105,194 - Psyr_4281 0.59 +0.2 5,105,194 - Psyr_4281 0.59 -1.9 5,105,194 - Psyr_4281 0.59 +1.7 5,105,194 - Psyr_4281 0.59 -2.5 5,105,194 - Psyr_4281 0.59 -2.8 5,105,194 - Psyr_4281 0.59 -1.2 5,105,194 - Psyr_4281 0.59 -1.4 5,105,194 - Psyr_4281 0.59 -2.2 5,105,194 - Psyr_4281 0.59 -1.1 5,105,352 + Psyr_4281 0.75 -0.8 5,105,377 - Psyr_4281 0.78 -2.0 5,105,544 + -0.2 5,105,544 + -1.6 5,105,544 + -1.3 5,105,544 + -0.7 5,105,544 + -1.6 5,105,544 + -3.1 5,105,544 + -3.8 5,105,544 + -0.1 5,105,544 + -0.3 5,105,545 - -1.2 5,105,545 - +0.4 5,105,545 - -1.2 5,105,545 - +1.3 5,105,545 - +0.6 5,105,545 - -1.6 5,105,545 - +0.5 5,105,545 - +0.1 5,105,545 - -1.6 5,105,545 - -0.9 5,105,545 - -1.2 5,105,545 - -1.6 5,105,545 - -3.8 5,105,545 - -0.3 5,105,607 + -2.8 5,105,607 + -0.4 5,105,607 + -1.5 5,105,608 - -0.8 5,105,728 - +1.3 5,105,728 - -2.1 5,105,728 - +0.8 5,105,728 - +0.4 5,105,763 + Psyr_4282 0.11 -1.0 5,105,763 + Psyr_4282 0.11 -1.6 5,105,763 + Psyr_4282 0.11 -1.1 5,105,763 + Psyr_4282 0.11 -1.9 5,105,763 + Psyr_4282 0.11 -4.2 5,105,764 - Psyr_4282 0.11 -2.3 5,105,764 - Psyr_4282 0.11 -0.5 5,105,764 - Psyr_4282 0.11 -0.6 5,105,794 - Psyr_4282 0.13 +1.4 5,105,877 + Psyr_4282 0.19 -2.7 5,105,967 + Psyr_4282 0.25 -1.9 5,105,968 - Psyr_4282 0.25 -1.6 5,105,989 - Psyr_4282 0.27 -0.1 5,106,094 + Psyr_4282 0.34 -0.5 5,106,095 - Psyr_4282 0.34 -1.6 5,106,192 + Psyr_4282 0.41 -2.5 5,106,193 - Psyr_4282 0.41 -1.3 5,106,193 - Psyr_4282 0.41 -1.2 5,106,199 + Psyr_4282 0.41 +0.1 5,106,200 - Psyr_4282 0.41 -0.1 5,106,200 - Psyr_4282 0.41 -0.7 5,106,747 + Psyr_4282 0.79 -1.0 5,106,747 + Psyr_4282 0.79 -3.4 5,106,748 - Psyr_4282 0.79 -0.7 5,106,748 - Psyr_4282 0.79 +0.7 5,106,748 - Psyr_4282 0.79 -0.9 5,106,748 - Psyr_4282 0.79 -2.8 5,106,885 + Psyr_4282 0.89 -1.7 5,106,885 + Psyr_4282 0.89 -2.2 5,106,886 - Psyr_4282 0.89 -0.2 5,106,897 + Psyr_4282 0.90 -1.8 5,106,945 + -0.5 5,106,945 + -0.7 5,106,946 - -0.9 5,107,025 + -2.1 5,107,025 + -3.1 5,107,025 + -1.2 5,107,025 + -2.9 5,107,025 + -1.3 5,107,025 + -2.5 5,107,025 + -0.3 5,107,025 + -4.7 5,107,025 + -2.9 5,107,025 + -0.3 5,107,025 + -2.3 5,107,025 + -0.7 5,107,025 + +1.0 5,107,025 + -0.6 5,107,025 + -1.3 5,107,025 + -0.8 5,107,025 + -2.1 5,107,025 + +0.0 5,107,025 + -0.4 5,107,025 + -1.5 5,107,026 - -1.9 5,107,026 - -2.3 5,107,026 - -1.6 5,107,026 - -0.3 5,107,026 - -1.3 5,107,026 - -1.3 5,107,026 - -1.0 5,107,026 - -1.6 5,107,026 - -1.4 5,107,026 - -0.7 5,107,026 - -0.3 5,107,026 - -1.8 5,107,028 - -2.6 5,107,045 + -2.6 5,107,045 + -0.3 5,107,045 + -1.6 5,107,045 + -2.9 5,107,045 + -3.1 5,107,045 + -3.3 5,107,045 + -1.6 5,107,045 + -2.0 5,107,045 + -2.3 5,107,045 + -3.3 5,107,045 + -0.6 5,107,045 + -0.6 5,107,045 + -1.3 5,107,045 + -0.7 5,107,045 + -0.3 5,107,045 + -1.0 5,107,045 + -2.3 5,107,046 - -1.8 5,107,046 - -1.2 5,107,046 - -1.9 5,107,046 - -1.1 5,107,046 - -1.2 5,107,046 - -2.9 5,107,046 - -0.9 5,107,046 - -1.3 5,107,046 - -1.6 5,107,046 - -0.6 5,107,046 - +0.3 5,107,046 - -3.9 5,107,121 + -1.7 5,107,121 + -1.6 5,107,121 + -0.9 5,107,121 + -0.5 5,107,121 + -3.5 5,107,121 + -1.9 5,107,122 - +0.3 5,107,122 - +0.3 5,107,122 - -3.4 5,107,122 - -0.2 5,107,122 - +0.8 5,107,122 - +0.6 5,107,122 - +0.8 5,107,131 + -0.9 5,107,195 + -0.9 5,107,196 - +1.1 5,107,196 - +0.8 5,107,196 - +0.5 5,107,237 + -2.3 5,107,252 + -3.1 5,107,298 + -1.3 5,107,378 + +2.0 5,107,531 + -0.7 5,107,558 + -1.3 5,107,578 + +0.9 5,107,578 + +0.2 5,107,578 + +1.0 5,107,579 - +0.5 5,107,579 - +1.3 5,107,579 - -0.9 5,107,579 - -0.4 5,107,945 + Psyr_4283 0.19 +0.4 5,107,945 + Psyr_4283 0.19 -0.2 5,107,946 - Psyr_4283 0.19 +1.7 5,107,956 + Psyr_4283 0.20 -0.6
Or see this region's nucleotide sequence