Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3479

Experiment: KB with Fusaric 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Fusaric 250 ug/ml
4,150,104	+		Psyr_3478	0.35	-0.1
4,150,104	+		Psyr_3478	0.35	+0.5
4,150,105	-		Psyr_3478	0.35	+0.9
4,150,105	-		Psyr_3478	0.35	+0.5
4,150,161	+		Psyr_3478	0.40	-0.0
4,150,161	+		Psyr_3478	0.40	-0.1
4,150,162	-		Psyr_3478	0.40	+2.1
4,150,162	-		Psyr_3478	0.40	-0.3
4,150,162	-		Psyr_3478	0.40	-0.4
4,150,197	+		Psyr_3478	0.42	+0.5
4,150,197	+		Psyr_3478	0.42	+0.5
4,150,255	-		Psyr_3478	0.47	+0.8
4,150,313	+		Psyr_3478	0.51	-0.1
4,150,313	+		Psyr_3478	0.51	-0.7
4,150,313	+		Psyr_3478	0.51	+0.1
4,150,313	+		Psyr_3478	0.51	-0.1
4,150,314	-		Psyr_3478	0.51	+1.5
4,150,314	-		Psyr_3478	0.51	-0.4
4,150,314	-		Psyr_3478	0.51	-0.1
4,150,314	-		Psyr_3478	0.51	-1.9
4,150,349	+		Psyr_3478	0.54	-0.3
4,150,350	-		Psyr_3478	0.54	-1.6
4,150,385	+		Psyr_3478	0.57	+0.5
4,150,400	+		Psyr_3478	0.58	-0.8
4,150,400	+		Psyr_3478	0.58	-1.5
4,150,400	+		Psyr_3478	0.58	+0.0
4,150,400	+		Psyr_3478	0.58	-1.3
4,150,400	+		Psyr_3478	0.58	+2.0
4,150,401	-		Psyr_3478	0.58	-1.1
4,150,401	-		Psyr_3478	0.58	-0.4
4,150,401	-		Psyr_3478	0.58	-1.4
4,150,412	+		Psyr_3478	0.59	+1.1
4,150,412	+		Psyr_3478	0.59	-1.1
4,150,412	+		Psyr_3478	0.59	-1.2
4,150,412	+		Psyr_3478	0.59	+1.4
4,150,412	+		Psyr_3478	0.59	-0.6
4,150,412	+		Psyr_3478	0.59	-1.0
4,150,412	+		Psyr_3478	0.59	+0.1
4,150,412	+		Psyr_3478	0.59	+0.1
4,150,412	+		Psyr_3478	0.59	+1.5
4,150,412	+		Psyr_3478	0.59	+1.1
4,150,412	+		Psyr_3478	0.59	+0.5
4,150,413	-		Psyr_3478	0.59	-1.4
4,150,413	-		Psyr_3478	0.59	+0.7
4,150,413	-		Psyr_3478	0.59	-0.1
4,150,413	-		Psyr_3478	0.59	+1.0
4,150,413	-		Psyr_3478	0.59	+1.3
4,150,413	-		Psyr_3478	0.59	-1.1
4,150,413	-		Psyr_3478	0.59	-1.4
4,150,413	-		Psyr_3478	0.59	-0.7
4,150,413	-		Psyr_3478	0.59	-1.5
4,150,413	-		Psyr_3478	0.59	+0.6
4,150,413	-		Psyr_3478	0.59	-0.4
4,150,413	-		Psyr_3478	0.59	-0.8
4,150,416	+		Psyr_3478	0.59	-0.5
4,150,416	+		Psyr_3478	0.59	+0.4
4,150,416	+		Psyr_3478	0.59	-0.7
4,150,417	-		Psyr_3478	0.59	-1.1
4,150,584	-		Psyr_3478	0.71	-1.3
4,150,584	-		Psyr_3478	0.71	-2.9
4,150,609	-		Psyr_3478	0.73	+0.2
4,150,620	-		Psyr_3478	0.74	-0.7
4,150,620	-		Psyr_3478	0.74	+0.6
4,150,659	-		Psyr_3478	0.77	+0.2
4,150,659	-		Psyr_3478	0.77	-2.1
4,150,815	+		Psyr_3478	0.89	-1.3
4,150,835	+				+0.5
4,150,836	-				-0.8
4,150,836	-				-1.1
4,150,836	-				+0.6
4,150,932	-				-0.7
4,150,989	+				+0.8
4,151,100	+		Psyr_3479	0.16	+0.3
4,151,101	-		Psyr_3479	0.16	+0.7
4,151,154	+		Psyr_3479	0.24	+0.3
4,151,154	+		Psyr_3479	0.24	-0.4
4,151,154	+		Psyr_3479	0.24	-0.2
4,151,155	-		Psyr_3479	0.24	-0.4
4,151,155	-		Psyr_3479	0.24	+1.7
4,151,155	-		Psyr_3479	0.24	-0.5
4,151,271	+		Psyr_3479	0.41	-2.7
4,151,272	-		Psyr_3479	0.41	+1.5
4,151,272	-		Psyr_3479	0.41	-0.8
4,151,419	-		Psyr_3479	0.62	-2.4
4,151,419	-		Psyr_3479	0.62	-1.0
4,151,419	-		Psyr_3479	0.62	-2.3
4,151,666	-				-0.2
4,151,691	+				+2.1
4,151,691	+				-1.3
4,151,692	-				-0.8
4,151,692	-				+1.1
4,151,820	+		Psyr_3480	0.29	-0.1
4,151,820	+		Psyr_3480	0.29	+0.6
4,151,823	+		Psyr_3480	0.29	-0.2
4,151,824	-		Psyr_3480	0.30	+0.7
4,151,824	-		Psyr_3480	0.30	+0.2
4,151,824	-		Psyr_3480	0.30	-2.4
4,151,824	-		Psyr_3480	0.30	-0.6
4,151,829	+		Psyr_3480	0.31	+1.3
4,151,829	+		Psyr_3480	0.31	+1.5
4,152,056	-		Psyr_3480	0.82	+1.5
4,152,138	+				+1.3
4,152,225	+		Psyr_3481	0.22	+0.4
4,152,225	+		Psyr_3481	0.22	+1.6
4,152,225	+		Psyr_3481	0.22	+0.5
4,152,225	+		Psyr_3481	0.22	-0.1
4,152,225	+		Psyr_3481	0.22	+0.3
4,152,226	-		Psyr_3481	0.22	-1.0
4,152,226	-		Psyr_3481	0.22	-1.1
4,152,291	+		Psyr_3481	0.38	-0.3
4,152,291	+		Psyr_3481	0.38	-2.3
4,152,292	-		Psyr_3481	0.38	+0.3
4,152,292	-		Psyr_3481	0.38	+0.7
4,152,292	-		Psyr_3481	0.38	-1.1
4,152,332	+		Psyr_3481	0.48	-0.1
4,152,512	+				-0.7
4,152,512	+				-0.6
4,152,512	+				+1.1
4,152,512	+				-0.4
4,152,512	+				-0.6
4,152,512	+				-0.4
4,152,512	+				-2.1
4,152,512	+				+0.5
4,152,512	+				+0.5
4,152,512	+				+2.0
4,152,512	+				-2.4
4,152,512	+				-0.2
4,152,512	+				+1.3
4,152,512	+				+0.8
4,152,512	+				-2.0
4,152,512	+				+0.9
4,152,512	+				+0.1
4,152,513	-				-1.2
4,152,513	-				-0.6
4,152,513	-				-0.9
4,152,513	-				-0.9
4,152,513	-				-0.4
4,152,513	-				-0.3
4,152,513	-				+0.2
4,152,513	-				+0.3
4,152,513	-				+0.5
4,152,513	-				-1.3
4,152,513	-				-1.8
4,152,513	-				+0.4
4,152,513	-				-0.8
4,152,513	-				-1.1
4,152,513	-				+0.2