Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3419 and Psyr_3420 are separated by 10 nucleotides Psyr_3420 and Psyr_3421 are separated by 2 nucleotides
Psyr_3419: Psyr_3419 - 4Fe-4S ferredoxin, iron-sulfur binding protein, at 4,082,060 to 4,083,472
_3419
Psyr_3420: Psyr_3420 - conserved hypothetical protein, at 4,083,483 to 4,084,019
_3420
Psyr_3421: Psyr_3421 - Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase, at 4,084,022 to 4,086,496
_3421
Position (kb) 4083
4084
4085 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4082.594 kb on + strand, within Psyr_3419 at 4082.690 kb on + strand, within Psyr_3419 at 4082.691 kb on - strand, within Psyr_3419 at 4082.691 kb on - strand, within Psyr_3419 at 4082.695 kb on + strand, within Psyr_3419 at 4082.721 kb on + strand, within Psyr_3419 at 4082.721 kb on + strand, within Psyr_3419 at 4082.722 kb on - strand, within Psyr_3419 at 4082.729 kb on + strand, within Psyr_3419 at 4082.729 kb on + strand, within Psyr_3419 at 4082.729 kb on + strand, within Psyr_3419 at 4082.729 kb on + strand, within Psyr_3419 at 4082.729 kb on + strand, within Psyr_3419 at 4082.730 kb on - strand, within Psyr_3419 at 4082.730 kb on - strand, within Psyr_3419 at 4082.730 kb on - strand, within Psyr_3419 at 4082.730 kb on - strand, within Psyr_3419 at 4082.730 kb on - strand, within Psyr_3419 at 4082.730 kb on - strand, within Psyr_3419 at 4082.975 kb on - strand, within Psyr_3419 at 4083.255 kb on - strand, within Psyr_3419 at 4083.463 kb on + strand at 4083.463 kb on + strand at 4083.463 kb on + strand at 4083.464 kb on - strand at 4083.464 kb on - strand at 4083.627 kb on + strand, within Psyr_3420 at 4083.627 kb on + strand, within Psyr_3420 at 4083.627 kb on + strand, within Psyr_3420 at 4083.627 kb on + strand at 4083.627 kb on + strand, within Psyr_3420 at 4083.627 kb on + strand, within Psyr_3420 at 4083.627 kb on + strand, within Psyr_3420 at 4083.630 kb on + strand, within Psyr_3420
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 4,082,594 + Psyr_3419 0.38 -1.1 4,082,690 + Psyr_3419 0.45 -2.1 4,082,691 - Psyr_3419 0.45 -1.8 4,082,691 - Psyr_3419 0.45 -0.5 4,082,695 + Psyr_3419 0.45 -1.4 4,082,721 + Psyr_3419 0.47 +0.5 4,082,721 + Psyr_3419 0.47 -0.5 4,082,722 - Psyr_3419 0.47 -1.4 4,082,729 + Psyr_3419 0.47 +1.1 4,082,729 + Psyr_3419 0.47 -0.9 4,082,729 + Psyr_3419 0.47 +1.5 4,082,729 + Psyr_3419 0.47 -1.1 4,082,729 + Psyr_3419 0.47 -1.1 4,082,730 - Psyr_3419 0.47 -0.5 4,082,730 - Psyr_3419 0.47 -1.8 4,082,730 - Psyr_3419 0.47 -1.1 4,082,730 - Psyr_3419 0.47 +1.8 4,082,730 - Psyr_3419 0.47 -0.1 4,082,730 - Psyr_3419 0.47 +0.5 4,082,975 - Psyr_3419 0.65 +2.1 4,083,255 - Psyr_3419 0.85 -2.3 4,083,463 + +0.2 4,083,463 + -0.7 4,083,463 + +1.4 4,083,464 - +0.1 4,083,464 - -2.1 4,083,627 + Psyr_3420 0.27 -0.2 4,083,627 + Psyr_3420 0.27 -0.9 4,083,627 + Psyr_3420 0.27 -0.8 4,083,627 + -0.8 4,083,627 + Psyr_3420 0.27 -0.8 4,083,627 + Psyr_3420 0.27 +0.1 4,083,627 + Psyr_3420 0.27 -1.1 4,083,630 + Psyr_3420 0.27 -2.0
Or see this region's nucleotide sequence