Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2816

Experiment: KB with Fusaric 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Fusaric 250 ug/ml
3,390,677	+				-3.0
3,390,677	+				+0.3
3,390,678	-				-0.8
3,390,680	+				-0.8
3,390,680	+				-3.3
3,390,680	+				-1.0
3,390,718	+				-2.5
3,390,719	-				-0.8
3,390,878	+				+0.4
3,390,878	+				-0.1
3,390,878	+				-0.8
3,390,879	-				-1.5
3,391,038	-				+0.7
3,391,111	+				+0.0
3,391,111	+				+1.2
3,391,111	+				+2.0
3,391,111	+				+1.8
3,391,111	+				+1.4
3,391,112	-				+0.5
3,391,112	-				+1.6
3,391,112	-				+1.5
3,391,127	+				+0.7
3,391,127	+				+0.6
3,391,127	+				-0.7
3,391,127	+				-0.2
3,391,128	-				-2.8
3,391,128	-				+0.3
3,391,171	+				+0.3
3,391,171	+				+0.1
3,391,171	+				+1.6
3,391,172	-				-0.6
3,391,172	-				-0.1
3,391,172	-				-1.0
3,391,549	-				+1.8
3,391,720	+				+1.4
3,391,721	-				+0.3
3,391,721	-				-0.6
3,391,721	-				+0.2
3,391,776	+		Psyr_2816	0.13	-0.1
3,391,776	+		Psyr_2816	0.13	+0.4
3,391,777	-		Psyr_2816	0.13	+0.3
3,391,807	+		Psyr_2816	0.17	-1.0
3,391,841	+		Psyr_2816	0.22	+1.2
3,391,891	+		Psyr_2816	0.28	+0.4
3,391,891	+		Psyr_2816	0.28	+0.9
3,391,891	+		Psyr_2816	0.28	+1.3
3,392,140	+		Psyr_2816	0.60	-1.0
3,392,141	-		Psyr_2816	0.60	+3.3
3,392,149	+		Psyr_2816	0.61	-1.1
3,392,149	+		Psyr_2816	0.61	+0.4
3,392,149	+		Psyr_2816	0.61	+0.9
3,392,300	+		Psyr_2816	0.81	-0.6
3,392,300	+		Psyr_2816	0.81	+1.8
3,392,300	+		Psyr_2816	0.81	+1.0
3,392,300	+		Psyr_2816	0.81	-0.9
3,392,301	-		Psyr_2816	0.81	-2.9
3,392,301	-		Psyr_2816	0.81	-1.1
3,392,301	-		Psyr_2816	0.81	+0.2
3,392,301	-		Psyr_2816	0.81	+1.0
3,392,301	-		Psyr_2816	0.81	+0.4
3,392,301	-		Psyr_2816	0.81	-0.9
3,392,301	-		Psyr_2816	0.81	-0.2
3,392,302	+		Psyr_2816	0.81	+0.9
3,392,302	+		Psyr_2816	0.81	-1.1
3,392,302	+		Psyr_2816	0.81	-0.2
3,392,302	+		Psyr_2816	0.81	+2.7
3,392,303	-		Psyr_2816	0.81	-1.1
3,392,303	-		Psyr_2816	0.81	+0.1
3,392,383	+				+1.4
3,392,500	+				-0.3
3,392,500	+				-0.8
3,392,585	+				-2.1
3,392,585	+				+0.8
3,392,625	+				+3.8
3,392,626	-				+0.1
3,392,626	-				-0.2
3,392,650	+				-1.5
3,392,650	+				-1.6
3,392,650	+				+2.4
3,392,650	+				+0.6
3,392,650	+				+0.6
3,392,650	+				-1.0
3,392,650	+				+0.6
3,392,650	+				-0.6
3,392,650	+				-0.3
3,392,650	+				-1.6
3,392,650	+				+0.9
3,392,651	-				-0.7
3,392,651	-				+1.4
3,392,651	-				+0.5
3,392,651	-				+0.0
3,392,651	-				+0.0
3,392,651	-				-1.4
3,392,651	-				-0.6
3,392,651	-				+0.4
3,392,651	-				+1.4
3,392,651	-				+0.7
3,392,725	-				+0.7
3,392,927	+		Psyr_2817	0.24	-1.1
3,392,934	+		Psyr_2817	0.25	+1.1
3,392,934	+		Psyr_2817	0.25	+0.3
3,392,934	+		Psyr_2817	0.25	-0.0
3,392,934	+		Psyr_2817	0.25	-3.1
3,392,934	+		Psyr_2817	0.25	-0.6
3,392,935	-		Psyr_2817	0.26	-1.1
3,392,935	-		Psyr_2817	0.26	+0.2
3,392,935	-		Psyr_2817	0.26	+0.2
3,392,935	-		Psyr_2817	0.26	+0.4
3,392,935	-		Psyr_2817	0.26	-1.6
3,392,935	-		Psyr_2817	0.26	+2.7
3,392,935	-		Psyr_2817	0.26	-0.1
3,392,935	-		Psyr_2817	0.26	+0.3
3,393,007	+		Psyr_2817	0.41	-1.0
3,393,007	+		Psyr_2817	0.41	+0.9
3,393,008	-		Psyr_2817	0.41	+1.3
3,393,008	-		Psyr_2817	0.41	+0.8
3,393,029	-		Psyr_2817	0.46	+0.6
3,393,092	+		Psyr_2817	0.59	+0.1
3,393,092	+		Psyr_2817	0.59	+2.8
3,393,092	+		Psyr_2817	0.59	-0.1
3,393,092	+		Psyr_2817	0.59	+1.3
3,393,092	+		Psyr_2817	0.59	+0.2
3,393,092	+				+2.4
3,393,093	-		Psyr_2817	0.59	+0.8
3,393,093	-		Psyr_2817	0.59	-1.1
3,393,093	-		Psyr_2817	0.59	-1.7
3,393,093	-		Psyr_2817	0.59	+0.7
3,393,093	-		Psyr_2817	0.59	+0.9
3,393,164	-		Psyr_2817	0.75	+0.1
3,393,264	+				+1.2
3,393,264	+				+1.0
3,393,264	+				+1.5
3,393,264	+				+2.8
3,393,264	+				-0.1
3,393,264	+				+0.4
3,393,264	+				-0.0
3,393,264	+				+1.4
3,393,265	-				+0.2
3,393,265	-				+2.8