Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1915

Experiment: KB with Fusaric 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Fusaric 250 ug/ml
2,188,297	+		Psyr_1914	0.35	-0.2
2,188,297	+		Psyr_1914	0.35	-1.2
2,188,297	+		Psyr_1914	0.35	+1.5
2,188,297	+		Psyr_1914	0.35	+0.1
2,188,297	+		Psyr_1914	0.35	-0.6
2,188,297	+		Psyr_1914	0.35	+0.5
2,188,298	-		Psyr_1914	0.35	+1.0
2,188,298	-		Psyr_1914	0.35	+1.1
2,188,300	+		Psyr_1914	0.35	-0.7
2,188,300	+		Psyr_1914	0.35	-1.2
2,188,300	+		Psyr_1914	0.35	-0.1
2,188,300	+		Psyr_1914	0.35	-0.4
2,188,301	-		Psyr_1914	0.35	-0.2
2,188,301	-		Psyr_1914	0.35	-0.5
2,188,301	-		Psyr_1914	0.35	+0.0
2,188,301	-		Psyr_1914	0.35	+0.2
2,188,301	-		Psyr_1914	0.35	+0.4
2,188,301	-		Psyr_1914	0.35	+0.2
2,188,306	+		Psyr_1914	0.36	-1.0
2,188,306	+		Psyr_1914	0.36	-0.7
2,188,306	+		Psyr_1914	0.36	+0.5
2,188,306	+		Psyr_1914	0.36	-2.2
2,188,306	+		Psyr_1914	0.36	-0.7
2,188,307	-		Psyr_1914	0.36	+0.3
2,188,352	-		Psyr_1914	0.41	-2.2
2,188,375	+		Psyr_1914	0.43	+0.2
2,188,376	-		Psyr_1914	0.43	-2.2
2,188,376	-		Psyr_1914	0.43	+1.5
2,188,384	+		Psyr_1914	0.44	+1.9
2,188,384	+		Psyr_1914	0.44	-0.2
2,188,384	+		Psyr_1914	0.44	+0.2
2,188,384	+		Psyr_1914	0.44	+0.5
2,188,384	+		Psyr_1914	0.44	-1.8
2,188,385	-		Psyr_1914	0.44	-1.0
2,188,385	-		Psyr_1914	0.44	+0.7
2,188,385	-		Psyr_1914	0.44	+1.9
2,188,385	-		Psyr_1914	0.44	-0.0
2,188,996	+				-1.6
2,188,997	-				+0.5
2,189,026	-				-0.7
2,189,036	-				+0.7
2,189,128	+				+2.2
2,189,128	+				-0.3
2,189,128	+				-0.0
2,189,128	+				-1.4
2,189,129	-				-0.7
2,189,129	-				-0.4
2,189,169	+				+0.1
2,189,169	+				+1.6
2,189,169	+				-3.3
2,189,169	+				+0.3
2,189,170	-				+0.0
2,189,170	-				-1.5
2,189,555	-		Psyr_1915	0.25	+0.8
2,189,563	+		Psyr_1915	0.26	+0.9
2,189,610	-				-1.5
2,189,610	-		Psyr_1915	0.29	+1.8
2,189,855	+		Psyr_1915	0.48	+0.2
2,189,855	+		Psyr_1915	0.48	+0.0
2,189,855	+		Psyr_1915	0.48	+0.3
2,189,855	+		Psyr_1915	0.48	+0.1
2,189,856	-		Psyr_1915	0.48	-0.3
2,189,856	-		Psyr_1915	0.48	+1.8
2,190,132	-		Psyr_1915	0.70	-2.0
2,190,356	+		Psyr_1915	0.87	+0.7
2,190,362	+		Psyr_1915	0.87	-0.4
2,190,362	+		Psyr_1915	0.87	+0.2
2,190,362	+		Psyr_1915	0.87	+1.0
2,190,362	+		Psyr_1915	0.87	+0.1
2,190,363	-		Psyr_1915	0.87	+1.1
2,190,440	+				+1.1
2,190,440	+				-0.1
2,190,440	+				+1.2
2,190,440	+				-1.0
2,190,440	+				-0.5
2,190,440	+				+1.1
2,190,440	+				-1.2
2,190,441	-				+0.6
2,190,441	-				-0.4
2,190,441	-				+0.7
2,190,441	-				-0.6
2,190,441	-				+0.4
2,190,441	-				-1.1
2,190,441	-				-0.8
2,190,441	-				-1.1
2,190,441	-				+0.5
2,190,441	-				+1.7
2,190,493	+				+0.2
2,190,585	-				+0.8
2,190,585	-				-0.1
2,190,585	-				-0.8
2,190,629	+				-1.5
2,190,632	-				-0.2
2,190,672	+				+0.8
2,190,673	-				-1.2
2,190,719	+		Psyr_1916	0.12	-0.8
2,190,834	+		Psyr_1916	0.38	-0.9
2,190,834	+		Psyr_1916	0.38	+1.1
2,190,834	+		Psyr_1916	0.38	+0.5
2,190,834	+		Psyr_1916	0.38	-0.2
2,190,835	-		Psyr_1916	0.39	-0.7
2,190,835	-		Psyr_1916	0.39	-1.8
2,190,835	-		Psyr_1916	0.39	+1.1
2,190,835	-		Psyr_1916	0.39	-2.0
2,191,054	+		Psyr_1916	0.88	+0.6
2,191,054	+		Psyr_1916	0.88	+0.5
2,191,054	+		Psyr_1916	0.88	-0.3
2,191,055	-		Psyr_1916	0.88	-1.7
2,191,055	-		Psyr_1916	0.88	-1.8
2,191,055	-		Psyr_1916	0.88	-3.0
2,191,055	-		Psyr_1916	0.88	+1.1
2,191,055	-		Psyr_1916	0.88	+0.2
2,191,055	-		Psyr_1916	0.88	-0.1
2,191,055	-		Psyr_1916	0.88	-0.1
2,191,168	+				+0.2
2,191,315	+		Psyr_1917	0.54	-0.7
2,191,315	+		Psyr_1917	0.54	+0.4
2,191,315	+		Psyr_1917	0.54	+0.7
2,191,315	+		Psyr_1917	0.54	-1.8
2,191,316	-		Psyr_1917	0.54	-0.0
2,191,316	-		Psyr_1917	0.54	-1.5
2,191,372	+		Psyr_1917	0.78	-2.7
2,191,372	+		Psyr_1917	0.78	+0.9
2,191,372	+		Psyr_1917	0.78	-1.2
2,191,372	+		Psyr_1917	0.78	-2.2
2,191,373	-		Psyr_1917	0.78	-1.8
2,191,373	-		Psyr_1917	0.78	+1.7
2,191,373	-		Psyr_1917	0.78	+1.1
2,191,373	-		Psyr_1917	0.78	+0.9
2,191,373	-		Psyr_1917	0.78	+0.3
2,191,373	-		Psyr_1917	0.78	+0.9
2,191,442	+				-0.3
2,191,443	-				-0.9
2,191,443	-				-0.8
2,191,443	-				-0.5
2,191,475	+				+0.3
2,191,475	+				-0.5
2,191,475	+				-1.8
2,191,475	+				+1.5
2,191,475	+				-0.1
2,191,475	+				-0.5
2,191,476	-				+0.1
2,191,476	-				-0.3
2,191,476	-				+2.1
2,191,476	-				+1.2
2,191,476	-				+0.5
2,191,476	-				+0.6
2,191,476	-				+0.3
2,191,500	+				-1.1
2,191,500	+				-0.6
2,191,515	-				-0.0