Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0862 and Psyr_0863 are separated by 227 nucleotides Psyr_0863 and Psyr_0864 are separated by 108 nucleotides Psyr_0864 and Psyr_0865 are separated by 267 nucleotides
Psyr_0862: Psyr_0862 - Acyltransferase 3, at 981,424 to 983,445
_0862
Psyr_0863: Psyr_0863 - PhnA protein, at 983,673 to 984,047
_0863
Psyr_0864: Psyr_0864 - Protein of unknown function DUF393, at 984,156 to 984,587
_0864
Psyr_0865: Psyr_0865 - General substrate transporter:Major facilitator superfamily, at 984,855 to 986,063
_0865
Position (kb) 984
985 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 983.228 kb on + strand, within Psyr_0862 at 983.257 kb on + strand at 983.257 kb on + strand at 983.257 kb on + strand at 983.257 kb on + strand at 983.257 kb on + strand at 983.257 kb on + strand at 983.258 kb on - strand at 983.258 kb on - strand at 983.258 kb on - strand at 983.258 kb on - strand at 983.463 kb on + strand at 983.463 kb on + strand at 983.463 kb on + strand at 983.463 kb on + strand at 983.463 kb on + strand at 983.464 kb on - strand at 983.464 kb on - strand at 983.464 kb on - strand at 983.464 kb on - strand at 983.480 kb on + strand at 983.480 kb on + strand at 983.496 kb on + strand at 983.496 kb on + strand at 983.496 kb on + strand at 983.496 kb on + strand at 983.496 kb on + strand at 983.496 kb on + strand at 983.496 kb on + strand at 983.496 kb on + strand at 983.496 kb on + strand at 983.496 kb on + strand at 983.496 kb on + strand at 983.497 kb on - strand at 983.497 kb on - strand at 983.497 kb on - strand at 983.497 kb on - strand at 983.501 kb on - strand at 983.529 kb on + strand at 983.530 kb on - strand at 983.578 kb on - strand at 983.618 kb on + strand at 983.619 kb on - strand at 983.619 kb on - strand at 983.619 kb on - strand at 983.665 kb on + strand at 983.667 kb on + strand at 983.667 kb on + strand at 983.667 kb on + strand at 983.667 kb on + strand at 983.667 kb on + strand at 983.667 kb on + strand at 983.667 kb on + strand at 983.667 kb on + strand at 983.667 kb on + strand at 983.667 kb on + strand at 983.667 kb on + strand at 983.668 kb on - strand at 983.668 kb on - strand at 983.668 kb on - strand at 983.668 kb on - strand at 983.668 kb on - strand at 983.668 kb on - strand at 983.668 kb on - strand at 983.743 kb on - strand, within Psyr_0863 at 983.743 kb on - strand, within Psyr_0863 at 983.748 kb on + strand, within Psyr_0863 at 983.748 kb on + strand, within Psyr_0863 at 983.749 kb on - strand, within Psyr_0863 at 983.749 kb on - strand, within Psyr_0863 at 983.749 kb on - strand, within Psyr_0863 at 983.749 kb on - strand, within Psyr_0863 at 983.749 kb on - strand, within Psyr_0863 at 983.749 kb on - strand, within Psyr_0863 at 983.749 kb on - strand, within Psyr_0863 at 983.749 kb on - strand, within Psyr_0863 at 983.749 kb on - strand, within Psyr_0863 at 984.353 kb on + strand, within Psyr_0864 at 984.354 kb on - strand, within Psyr_0864 at 984.354 kb on - strand, within Psyr_0864 at 984.489 kb on + strand, within Psyr_0864 at 984.490 kb on - strand, within Psyr_0864 at 984.531 kb on + strand, within Psyr_0864 at 984.531 kb on + strand, within Psyr_0864 at 984.605 kb on + strand at 984.605 kb on + strand at 984.606 kb on - strand at 984.652 kb on + strand at 984.692 kb on + strand at 984.693 kb on - strand at 984.781 kb on + strand at 984.781 kb on + strand at 984.782 kb on - strand at 984.782 kb on - strand at 984.860 kb on - strand at 984.887 kb on + strand at 984.888 kb on - strand at 984.888 kb on - strand at 984.968 kb on + strand at 984.968 kb on + strand at 984.968 kb on + strand at 984.969 kb on - strand at 985.026 kb on + strand, within Psyr_0865 at 985.026 kb on + strand, within Psyr_0865 at 985.026 kb on + strand, within Psyr_0865 at 985.026 kb on + strand, within Psyr_0865 at 985.026 kb on + strand, within Psyr_0865 at 985.026 kb on + strand, within Psyr_0865 at 985.026 kb on + strand, within Psyr_0865 at 985.026 kb on + strand, within Psyr_0865 at 985.026 kb on + strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.027 kb on - strand, within Psyr_0865 at 985.292 kb on + strand, within Psyr_0865 at 985.310 kb on - strand, within Psyr_0865 at 985.310 kb on - strand, within Psyr_0865 at 985.396 kb on + strand, within Psyr_0865 at 985.396 kb on + strand, within Psyr_0865 at 985.397 kb on - strand, within Psyr_0865 at 985.500 kb on + strand, within Psyr_0865 at 985.500 kb on + strand, within Psyr_0865 at 985.501 kb on - strand, within Psyr_0865 at 985.501 kb on - strand, within Psyr_0865 at 985.501 kb on - strand, within Psyr_0865 at 985.542 kb on + strand, within Psyr_0865 at 985.543 kb on - strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.548 kb on + strand, within Psyr_0865 at 985.549 kb on - strand, within Psyr_0865 at 985.549 kb on - strand, within Psyr_0865 at 985.549 kb on - strand, within Psyr_0865 at 985.549 kb on - strand, within Psyr_0865 at 985.549 kb on - strand, within Psyr_0865 at 985.549 kb on - strand, within Psyr_0865 at 985.549 kb on - strand, within Psyr_0865 at 985.549 kb on - strand, within Psyr_0865 at 985.549 kb on - strand, within Psyr_0865 at 985.549 kb on - strand, within Psyr_0865
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 983,228 + Psyr_0862 0.89 +1.6 983,257 + +0.8 983,257 + +0.3 983,257 + +3.0 983,257 + +0.0 983,257 + -0.3 983,257 + -0.7 983,258 - +1.3 983,258 - -0.4 983,258 - +0.7 983,258 - +0.3 983,463 + -0.3 983,463 + +0.1 983,463 + -0.6 983,463 + +1.0 983,463 + -1.9 983,464 - -3.5 983,464 - +0.3 983,464 - -0.1 983,464 - -0.4 983,480 + +0.4 983,480 + -0.7 983,496 + -0.3 983,496 + -0.0 983,496 + -0.3 983,496 + +0.2 983,496 + -0.3 983,496 + -0.4 983,496 + +0.8 983,496 + -0.7 983,496 + -0.1 983,496 + -2.7 983,496 + +0.5 983,497 - -1.6 983,497 - +0.9 983,497 - +1.3 983,497 - +0.0 983,501 - +0.9 983,529 + -0.2 983,530 - -0.0 983,578 - -0.5 983,618 + -1.0 983,619 - -0.6 983,619 - -0.2 983,619 - -1.1 983,665 + +1.5 983,667 + -1.7 983,667 + +0.8 983,667 + -0.5 983,667 + +0.7 983,667 + -0.2 983,667 + +0.5 983,667 + +0.5 983,667 + -1.8 983,667 + +0.7 983,667 + +0.5 983,667 + -0.6 983,668 - -1.0 983,668 - -0.7 983,668 - -1.2 983,668 - -1.2 983,668 - -2.2 983,668 - -1.3 983,668 - -0.1 983,743 - Psyr_0863 0.19 -2.2 983,743 - Psyr_0863 0.19 -1.5 983,748 + Psyr_0863 0.20 +1.1 983,748 + Psyr_0863 0.20 +1.5 983,749 - Psyr_0863 0.20 -0.4 983,749 - Psyr_0863 0.20 -0.2 983,749 - Psyr_0863 0.20 -1.8 983,749 - Psyr_0863 0.20 -1.7 983,749 - Psyr_0863 0.20 -1.9 983,749 - Psyr_0863 0.20 -0.3 983,749 - Psyr_0863 0.20 -0.1 983,749 - Psyr_0863 0.20 -1.2 983,749 - Psyr_0863 0.20 -0.0 984,353 + Psyr_0864 0.46 -2.0 984,354 - Psyr_0864 0.46 -1.1 984,354 - Psyr_0864 0.46 +0.2 984,489 + Psyr_0864 0.77 -0.1 984,490 - Psyr_0864 0.77 +0.7 984,531 + Psyr_0864 0.87 +0.5 984,531 + Psyr_0864 0.87 -2.9 984,605 + -0.1 984,605 + -1.1 984,606 - -0.1 984,652 + +0.2 984,692 + -0.5 984,693 - +0.2 984,781 + +0.2 984,781 + -0.2 984,782 - -0.7 984,782 - -0.6 984,860 - -3.1 984,887 + -1.0 984,888 - -0.8 984,888 - +0.7 984,968 + -1.6 984,968 + -1.7 984,968 + +0.5 984,969 - -1.3 985,026 + Psyr_0865 0.14 -0.8 985,026 + Psyr_0865 0.14 -0.8 985,026 + Psyr_0865 0.14 +2.5 985,026 + Psyr_0865 0.14 +0.3 985,026 + Psyr_0865 0.14 -0.7 985,026 + Psyr_0865 0.14 -0.8 985,026 + Psyr_0865 0.14 +0.1 985,026 + Psyr_0865 0.14 -1.0 985,026 + Psyr_0865 0.14 -1.2 985,027 - Psyr_0865 0.14 +1.0 985,027 - Psyr_0865 0.14 -0.9 985,027 - Psyr_0865 0.14 -0.3 985,027 - Psyr_0865 0.14 +0.3 985,027 - Psyr_0865 0.14 +0.6 985,027 - Psyr_0865 0.14 -0.2 985,027 - Psyr_0865 0.14 -0.8 985,027 - Psyr_0865 0.14 -1.0 985,027 - Psyr_0865 0.14 -0.8 985,027 - Psyr_0865 0.14 -0.5 985,027 - Psyr_0865 0.14 -0.6 985,027 - Psyr_0865 0.14 -1.7 985,027 - Psyr_0865 0.14 +1.0 985,027 - Psyr_0865 0.14 -2.2 985,027 - Psyr_0865 0.14 -0.3 985,027 - Psyr_0865 0.14 -0.7 985,027 - Psyr_0865 0.14 -0.7 985,292 + Psyr_0865 0.36 -0.8 985,310 - Psyr_0865 0.38 -1.5 985,310 - Psyr_0865 0.38 -3.8 985,396 + Psyr_0865 0.45 -0.6 985,396 + Psyr_0865 0.45 -0.9 985,397 - Psyr_0865 0.45 -0.1 985,500 + Psyr_0865 0.53 -0.6 985,500 + Psyr_0865 0.53 -0.3 985,501 - Psyr_0865 0.53 +1.0 985,501 - Psyr_0865 0.53 -0.3 985,501 - Psyr_0865 0.53 +0.1 985,542 + Psyr_0865 0.57 +1.4 985,543 - Psyr_0865 0.57 -2.0 985,548 + Psyr_0865 0.57 +0.3 985,548 + Psyr_0865 0.57 -1.1 985,548 + Psyr_0865 0.57 -0.6 985,548 + Psyr_0865 0.57 -0.5 985,548 + Psyr_0865 0.57 +0.2 985,548 + Psyr_0865 0.57 +0.1 985,548 + Psyr_0865 0.57 +0.9 985,548 + Psyr_0865 0.57 -2.2 985,548 + Psyr_0865 0.57 +1.3 985,548 + Psyr_0865 0.57 -0.1 985,548 + Psyr_0865 0.57 +0.7 985,548 + Psyr_0865 0.57 -0.6 985,548 + Psyr_0865 0.57 -1.3 985,548 + Psyr_0865 0.57 -2.3 985,548 + Psyr_0865 0.57 -0.9 985,549 - Psyr_0865 0.57 +0.5 985,549 - Psyr_0865 0.57 -0.3 985,549 - Psyr_0865 0.57 +0.7 985,549 - Psyr_0865 0.57 -1.0 985,549 - Psyr_0865 0.57 -1.3 985,549 - Psyr_0865 0.57 -0.3 985,549 - Psyr_0865 0.57 -0.3 985,549 - Psyr_0865 0.57 +0.9 985,549 - Psyr_0865 0.57 +0.3 985,549 - Psyr_0865 0.57 -0.6
Or see this region's nucleotide sequence