Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0391 and Psyr_0392 are separated by 112 nucleotides Psyr_0392 and Psyr_0393 overlap by 17 nucleotides Psyr_0393 and Psyr_0394 are separated by 107 nucleotides Psyr_0394 and Psyr_0395 are separated by 66 nucleotides
Psyr_0391: Psyr_0391 - Poly granule associated, at 419,054 to 419,746
_0391
Psyr_0392: Psyr_0392 - hypothetical protein, at 419,859 to 420,164
_0392
Psyr_0393: Psyr_0393 - Protein of unknown function DUF971, at 420,148 to 420,519
_0393
Psyr_0394: Psyr_0394 - Heat shock protein HslU, at 420,627 to 421,964
_0394
Psyr_0395: Psyr_0395 - HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B, at 422,031 to 422,609
_0395
Position (kb) 420
421
422 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 419.696 kb on - strand at 419.747 kb on + strand at 419.747 kb on + strand at 419.748 kb on - strand at 419.769 kb on + strand at 419.769 kb on + strand at 419.770 kb on - strand at 419.770 kb on - strand at 419.796 kb on - strand at 419.868 kb on + strand at 419.868 kb on + strand at 419.869 kb on - strand at 419.869 kb on - strand at 419.869 kb on - strand at 419.945 kb on + strand, within Psyr_0392 at 419.946 kb on - strand, within Psyr_0392 at 419.988 kb on + strand, within Psyr_0392 at 419.988 kb on + strand, within Psyr_0392 at 419.988 kb on + strand, within Psyr_0392 at 419.989 kb on - strand, within Psyr_0392 at 419.989 kb on - strand, within Psyr_0392 at 419.989 kb on - strand, within Psyr_0392 at 420.018 kb on + strand, within Psyr_0392 at 420.018 kb on + strand, within Psyr_0392 at 420.018 kb on + strand, within Psyr_0392 at 420.018 kb on + strand, within Psyr_0392 at 420.018 kb on + strand, within Psyr_0392 at 420.018 kb on + strand, within Psyr_0392 at 420.019 kb on - strand, within Psyr_0392 at 420.019 kb on - strand, within Psyr_0392 at 420.019 kb on - strand, within Psyr_0392 at 420.218 kb on + strand, within Psyr_0393 at 420.219 kb on - strand, within Psyr_0393 at 420.219 kb on - strand, within Psyr_0393 at 420.219 kb on - strand, within Psyr_0393 at 420.219 kb on - strand, within Psyr_0393 at 420.264 kb on - strand, within Psyr_0393 at 420.264 kb on - strand, within Psyr_0393 at 420.264 kb on - strand, within Psyr_0393 at 420.264 kb on - strand, within Psyr_0393 at 420.320 kb on + strand, within Psyr_0393 at 420.320 kb on + strand, within Psyr_0393 at 420.321 kb on - strand, within Psyr_0393 at 420.321 kb on - strand, within Psyr_0393 at 420.321 kb on - strand, within Psyr_0393 at 420.464 kb on + strand, within Psyr_0393 at 420.493 kb on - strand at 420.493 kb on - strand at 420.540 kb on - strand at 420.540 kb on - strand at 420.612 kb on + strand at 420.613 kb on - strand at 420.613 kb on - strand at 420.615 kb on + strand at 420.615 kb on + strand at 420.615 kb on + strand at 420.615 kb on + strand at 420.615 kb on + strand at 420.616 kb on - strand at 420.616 kb on - strand at 420.616 kb on - strand at 420.616 kb on - strand at 420.616 kb on - strand at 420.616 kb on - strand at 420.635 kb on + strand at 420.635 kb on + strand at 420.635 kb on + strand at 420.635 kb on + strand at 420.636 kb on - strand at 420.636 kb on - strand at 420.636 kb on - strand at 420.636 kb on - strand at 420.637 kb on + strand at 420.637 kb on + strand at 420.680 kb on + strand at 420.688 kb on + strand at 420.688 kb on + strand at 420.688 kb on + strand at 420.689 kb on - strand at 420.689 kb on - strand at 420.908 kb on - strand, within Psyr_0394 at 421.175 kb on + strand, within Psyr_0394 at 421.175 kb on + strand, within Psyr_0394 at 421.175 kb on + strand, within Psyr_0394 at 421.176 kb on - strand, within Psyr_0394 at 421.680 kb on + strand, within Psyr_0394 at 421.681 kb on - strand, within Psyr_0394 at 421.696 kb on + strand, within Psyr_0394 at 421.697 kb on - strand, within Psyr_0394 at 421.825 kb on - strand, within Psyr_0394 at 421.825 kb on - strand, within Psyr_0394 at 421.919 kb on + strand at 421.920 kb on - strand at 421.985 kb on + strand at 422.446 kb on + strand, within Psyr_0395 at 422.447 kb on - strand, within Psyr_0395 at 422.458 kb on - strand, within Psyr_0395 at 422.458 kb on - strand, within Psyr_0395 at 422.458 kb on - strand, within Psyr_0395 at 422.528 kb on + strand, within Psyr_0395 at 422.628 kb on - strand at 422.665 kb on + strand at 422.666 kb on - strand at 422.666 kb on - strand at 422.687 kb on + strand at 422.842 kb on - strand at 422.842 kb on - strand at 422.842 kb on - strand at 422.901 kb on - strand at 422.901 kb on - strand at 422.932 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 419,696 - -2.2 419,747 + +0.6 419,747 + +1.5 419,748 - +1.4 419,769 + +2.0 419,769 + -1.0 419,770 - -0.7 419,770 - +0.0 419,796 - +1.4 419,868 + -0.5 419,868 + +0.8 419,869 - +0.8 419,869 - +0.2 419,869 - -0.8 419,945 + Psyr_0392 0.28 -0.5 419,946 - Psyr_0392 0.28 +0.2 419,988 + Psyr_0392 0.42 -0.2 419,988 + Psyr_0392 0.42 +0.4 419,988 + Psyr_0392 0.42 +1.3 419,989 - Psyr_0392 0.42 +0.4 419,989 - Psyr_0392 0.42 -0.0 419,989 - Psyr_0392 0.42 -0.8 420,018 + Psyr_0392 0.52 +0.6 420,018 + Psyr_0392 0.52 -1.8 420,018 + Psyr_0392 0.52 -1.1 420,018 + Psyr_0392 0.52 +0.6 420,018 + Psyr_0392 0.52 -0.4 420,018 + Psyr_0392 0.52 +0.2 420,019 - Psyr_0392 0.52 +0.3 420,019 - Psyr_0392 0.52 -1.5 420,019 - Psyr_0392 0.52 +0.4 420,218 + Psyr_0393 0.19 -1.2 420,219 - Psyr_0393 0.19 -0.8 420,219 - Psyr_0393 0.19 -0.5 420,219 - Psyr_0393 0.19 -0.8 420,219 - Psyr_0393 0.19 -1.8 420,264 - Psyr_0393 0.31 -1.8 420,264 - Psyr_0393 0.31 -1.8 420,264 - Psyr_0393 0.31 -0.9 420,264 - Psyr_0393 0.31 +0.7 420,320 + Psyr_0393 0.46 +0.1 420,320 + Psyr_0393 0.46 -0.2 420,321 - Psyr_0393 0.47 -1.3 420,321 - Psyr_0393 0.47 -1.2 420,321 - Psyr_0393 0.47 -2.3 420,464 + Psyr_0393 0.85 +0.5 420,493 - +2.6 420,493 - +1.2 420,540 - +0.6 420,540 - +0.5 420,612 + -0.1 420,613 - -0.4 420,613 - +0.1 420,615 + +2.9 420,615 + +0.3 420,615 + -2.6 420,615 + -1.0 420,615 + -1.4 420,616 - +1.2 420,616 - +0.0 420,616 - +0.8 420,616 - -1.4 420,616 - -1.8 420,616 - +2.2 420,635 + -0.7 420,635 + -1.8 420,635 + -0.8 420,635 + -0.5 420,636 - +0.5 420,636 - -2.5 420,636 - +0.2 420,636 - -1.9 420,637 + +1.4 420,637 + -1.0 420,680 + +0.1 420,688 + -1.4 420,688 + +0.8 420,688 + +0.8 420,689 - -1.5 420,689 - -0.6 420,908 - Psyr_0394 0.21 -0.0 421,175 + Psyr_0394 0.41 -2.2 421,175 + Psyr_0394 0.41 -1.8 421,175 + Psyr_0394 0.41 +1.8 421,176 - Psyr_0394 0.41 -1.7 421,680 + Psyr_0394 0.79 -1.2 421,681 - Psyr_0394 0.79 -1.4 421,696 + Psyr_0394 0.80 -1.1 421,697 - Psyr_0394 0.80 -1.8 421,825 - Psyr_0394 0.90 -0.6 421,825 - Psyr_0394 0.90 -0.2 421,919 + -0.1 421,920 - +0.5 421,985 + -0.4 422,446 + Psyr_0395 0.72 -0.7 422,447 - Psyr_0395 0.72 -1.5 422,458 - Psyr_0395 0.74 -0.8 422,458 - Psyr_0395 0.74 -0.8 422,458 - Psyr_0395 0.74 -0.8 422,528 + Psyr_0395 0.86 +0.8 422,628 - -1.2 422,665 + -2.1 422,666 - +0.2 422,666 - -2.0 422,687 + -0.2 422,842 - -2.1 422,842 - -0.2 422,842 - +0.7 422,901 - -1.5 422,901 - +0.9 422,932 - +0.2
Or see this region's nucleotide sequence