Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0372 and Psyr_0373 overlap by 1 nucleotides Psyr_0373 and Psyr_0374 are separated by 433 nucleotides Psyr_0374 and Psyr_0375 are separated by 280 nucleotides
Psyr_0372: Psyr_0372 - CDS, at 396,478 to 396,747
_0372
Psyr_0373: Psyr_0373 - CDS, at 396,747 to 397,178
_0373
Psyr_0374: Psyr_0374 - Phosphorylase, at 397,612 to 400,062
_0374
Psyr_0375: Psyr_0375 - prolyl aminopeptidase, Serine peptidase, MEROPS family S33, at 400,343 to 401,314
_0375
Position (kb) 397
398
399
400
401 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 397.123 kb on + strand, within Psyr_0373 at 397.123 kb on + strand, within Psyr_0373 at 397.124 kb on - strand, within Psyr_0373 at 397.140 kb on + strand at 397.140 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.224 kb on + strand at 397.224 kb on + strand at 397.224 kb on + strand at 397.224 kb on + strand at 397.224 kb on + strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.226 kb on + strand at 397.226 kb on + strand at 397.226 kb on + strand at 397.226 kb on + strand at 397.226 kb on + strand at 397.226 kb on + strand at 397.227 kb on - strand at 397.227 kb on - strand at 397.227 kb on - strand at 397.227 kb on - strand at 397.227 kb on - strand at 397.227 kb on - strand at 397.249 kb on + strand at 397.257 kb on + strand at 397.258 kb on - strand at 397.258 kb on - strand at 397.335 kb on - strand at 397.488 kb on + strand at 397.489 kb on - strand at 397.590 kb on + strand at 397.591 kb on - strand at 397.799 kb on + strand at 397.800 kb on - strand at 397.800 kb on - strand at 398.034 kb on + strand, within Psyr_0374 at 398.162 kb on + strand, within Psyr_0374 at 398.162 kb on + strand, within Psyr_0374 at 398.162 kb on + strand, within Psyr_0374 at 398.162 kb on + strand, within Psyr_0374 at 398.162 kb on + strand, within Psyr_0374 at 398.162 kb on + strand, within Psyr_0374 at 398.162 kb on + strand, within Psyr_0374 at 398.162 kb on + strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.163 kb on - strand, within Psyr_0374 at 398.267 kb on + strand, within Psyr_0374 at 398.267 kb on + strand, within Psyr_0374 at 398.345 kb on + strand, within Psyr_0374 at 398.387 kb on + strand, within Psyr_0374 at 398.897 kb on + strand, within Psyr_0374 at 398.897 kb on + strand, within Psyr_0374 at 398.897 kb on + strand, within Psyr_0374 at 398.897 kb on + strand, within Psyr_0374 at 398.897 kb on + strand, within Psyr_0374 at 398.897 kb on + strand, within Psyr_0374 at 398.898 kb on - strand, within Psyr_0374 at 398.898 kb on - strand, within Psyr_0374 at 398.987 kb on + strand, within Psyr_0374 at 398.987 kb on + strand, within Psyr_0374 at 398.988 kb on - strand, within Psyr_0374 at 398.988 kb on - strand, within Psyr_0374 at 399.195 kb on - strand, within Psyr_0374 at 399.261 kb on + strand, within Psyr_0374 at 399.262 kb on - strand, within Psyr_0374 at 399.338 kb on - strand, within Psyr_0374 at 399.338 kb on - strand, within Psyr_0374 at 399.379 kb on - strand, within Psyr_0374 at 399.407 kb on + strand, within Psyr_0374 at 399.407 kb on + strand, within Psyr_0374 at 399.442 kb on + strand, within Psyr_0374 at 399.442 kb on + strand, within Psyr_0374 at 399.443 kb on - strand, within Psyr_0374 at 399.443 kb on - strand, within Psyr_0374 at 399.506 kb on + strand, within Psyr_0374 at 399.506 kb on + strand, within Psyr_0374 at 399.506 kb on + strand, within Psyr_0374 at 399.507 kb on - strand, within Psyr_0374 at 399.507 kb on - strand, within Psyr_0374 at 399.812 kb on + strand, within Psyr_0374 at 399.813 kb on - strand, within Psyr_0374 at 399.813 kb on - strand, within Psyr_0374 at 399.848 kb on + strand at 399.848 kb on + strand at 399.849 kb on - strand at 399.849 kb on - strand at 399.849 kb on - strand at 399.852 kb on - strand at 399.875 kb on + strand at 399.876 kb on - strand at 399.876 kb on - strand at 399.888 kb on + strand at 399.888 kb on + strand at 399.889 kb on - strand at 399.912 kb on + strand at 399.990 kb on - strand at 399.990 kb on - strand at 399.990 kb on - strand at 400.078 kb on + strand at 400.106 kb on + strand at 400.106 kb on + strand at 400.107 kb on - strand at 400.107 kb on - strand at 400.114 kb on - strand at 400.114 kb on - strand at 400.114 kb on - strand at 400.130 kb on - strand at 400.130 kb on - strand at 400.130 kb on - strand at 400.152 kb on - strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.163 kb on + strand at 400.164 kb on - strand at 400.164 kb on - strand at 400.164 kb on - strand at 400.164 kb on - strand at 400.287 kb on + strand at 400.287 kb on + strand at 400.287 kb on + strand at 400.287 kb on + strand at 400.287 kb on + strand at 400.288 kb on - strand at 400.307 kb on + strand at 400.307 kb on + strand at 400.307 kb on + strand at 400.307 kb on + strand at 400.308 kb on - strand at 400.310 kb on + strand at 400.310 kb on + strand at 400.310 kb on + strand at 400.310 kb on + strand at 400.310 kb on + strand at 400.310 kb on + strand at 400.310 kb on + strand at 400.311 kb on - strand at 400.311 kb on - strand at 400.311 kb on - strand at 400.311 kb on - strand at 400.311 kb on - strand at 400.311 kb on - strand at 400.311 kb on - strand at 400.311 kb on - strand at 400.311 kb on - strand at 400.311 kb on - strand at 400.331 kb on + strand at 400.331 kb on + strand at 400.331 kb on + strand at 400.331 kb on + strand at 400.331 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.342 kb on + strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.343 kb on - strand at 400.415 kb on + strand at 400.415 kb on + strand at 400.416 kb on - strand at 400.416 kb on - strand at 400.460 kb on - strand, within Psyr_0375 at 400.506 kb on - strand, within Psyr_0375 at 400.506 kb on - strand, within Psyr_0375 at 400.506 kb on - strand, within Psyr_0375 at 400.506 kb on - strand, within Psyr_0375 at 400.697 kb on + strand, within Psyr_0375 at 400.697 kb on + strand, within Psyr_0375 at 400.697 kb on + strand, within Psyr_0375 at 400.697 kb on + strand, within Psyr_0375 at 400.781 kb on + strand, within Psyr_0375 at 400.781 kb on + strand, within Psyr_0375 at 400.814 kb on + strand, within Psyr_0375 at 400.814 kb on + strand, within Psyr_0375 at 400.814 kb on + strand, within Psyr_0375 at 400.815 kb on - strand, within Psyr_0375 at 400.815 kb on - strand, within Psyr_0375 at 400.815 kb on - strand, within Psyr_0375 at 400.826 kb on + strand, within Psyr_0375 at 400.826 kb on + strand, within Psyr_0375 at 400.826 kb on + strand, within Psyr_0375 at 400.826 kb on + strand, within Psyr_0375 at 400.827 kb on - strand, within Psyr_0375 at 400.827 kb on - strand, within Psyr_0375 at 400.827 kb on - strand, within Psyr_0375 at 401.040 kb on - strand, within Psyr_0375 at 401.040 kb on - strand, within Psyr_0375 at 401.040 kb on - strand, within Psyr_0375
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 397,123 + Psyr_0373 0.87 -0.2 397,123 + Psyr_0373 0.87 -0.4 397,124 - Psyr_0373 0.87 +0.8 397,140 + -1.6 397,140 + -0.6 397,222 + +0.6 397,222 + -0.0 397,222 + -0.5 397,222 + +0.5 397,222 + +0.2 397,222 + -0.4 397,222 + +0.7 397,222 + +0.8 397,222 + -0.4 397,222 + -0.0 397,222 + -0.3 397,222 + +0.0 397,222 + -0.3 397,222 + +0.5 397,222 + +0.1 397,222 + +0.1 397,223 - -1.5 397,223 - -0.1 397,223 - +1.3 397,223 - +0.4 397,223 - +1.8 397,223 - +0.4 397,223 - +0.7 397,223 - +0.4 397,223 - -0.0 397,223 - -0.3 397,223 - -2.3 397,223 - -1.6 397,223 - +1.2 397,223 - -0.7 397,223 - -0.5 397,224 + -0.2 397,224 + +0.9 397,224 + +0.9 397,224 + -0.1 397,224 + +1.4 397,225 - +0.7 397,225 - +0.0 397,225 - +0.5 397,225 - +0.5 397,225 - -0.1 397,225 - +0.4 397,225 - -0.4 397,225 - +0.4 397,225 - +0.8 397,225 - +0.1 397,225 - -0.3 397,225 - -0.7 397,225 - -2.0 397,225 - +0.5 397,225 - +0.5 397,226 + +0.1 397,226 + -2.6 397,226 + +0.4 397,226 + +0.2 397,226 + +0.1 397,226 + -0.6 397,227 - -0.1 397,227 - -0.7 397,227 - -2.0 397,227 - -0.4 397,227 - +2.3 397,227 - -0.0 397,249 + -0.1 397,257 + -0.0 397,258 - -0.5 397,258 - +1.4 397,335 - +0.7 397,488 + +1.3 397,489 - -0.2 397,590 + -0.5 397,591 - -0.8 397,799 + -0.1 397,800 - +1.2 397,800 - -0.1 398,034 + Psyr_0374 0.17 -0.2 398,162 + Psyr_0374 0.22 -1.8 398,162 + Psyr_0374 0.22 -2.3 398,162 + Psyr_0374 0.22 -1.2 398,162 + Psyr_0374 0.22 +1.8 398,162 + Psyr_0374 0.22 +1.0 398,162 + Psyr_0374 0.22 +0.8 398,162 + Psyr_0374 0.22 -1.2 398,162 + Psyr_0374 0.22 +0.5 398,163 - Psyr_0374 0.22 -0.1 398,163 - Psyr_0374 0.22 +1.4 398,163 - Psyr_0374 0.22 +1.1 398,163 - Psyr_0374 0.22 +1.1 398,163 - Psyr_0374 0.22 +0.2 398,163 - Psyr_0374 0.22 +1.4 398,163 - Psyr_0374 0.22 +1.2 398,163 - Psyr_0374 0.22 +0.6 398,163 - Psyr_0374 0.22 +0.5 398,163 - Psyr_0374 0.22 -2.0 398,163 - Psyr_0374 0.22 +0.5 398,163 - Psyr_0374 0.22 -0.3 398,163 - Psyr_0374 0.22 -0.3 398,163 - Psyr_0374 0.22 +0.8 398,163 - Psyr_0374 0.22 -0.7 398,163 - Psyr_0374 0.22 +1.0 398,267 + Psyr_0374 0.27 +0.2 398,267 + Psyr_0374 0.27 +2.0 398,345 + Psyr_0374 0.30 -0.7 398,387 + Psyr_0374 0.32 +0.7 398,897 + Psyr_0374 0.52 +0.3 398,897 + Psyr_0374 0.52 +0.1 398,897 + Psyr_0374 0.52 +0.4 398,897 + Psyr_0374 0.52 +1.0 398,897 + Psyr_0374 0.52 +3.4 398,897 + Psyr_0374 0.52 -0.5 398,898 - Psyr_0374 0.52 +2.7 398,898 - Psyr_0374 0.52 +1.5 398,987 + Psyr_0374 0.56 -1.7 398,987 + Psyr_0374 0.56 +0.7 398,988 - Psyr_0374 0.56 +0.4 398,988 - Psyr_0374 0.56 -1.7 399,195 - Psyr_0374 0.65 -0.7 399,261 + Psyr_0374 0.67 +1.1 399,262 - Psyr_0374 0.67 -0.2 399,338 - Psyr_0374 0.70 +0.1 399,338 - Psyr_0374 0.70 +1.6 399,379 - Psyr_0374 0.72 +1.1 399,407 + Psyr_0374 0.73 +0.5 399,407 + Psyr_0374 0.73 +1.3 399,442 + Psyr_0374 0.75 -1.0 399,442 + Psyr_0374 0.75 +0.5 399,443 - Psyr_0374 0.75 -0.6 399,443 - Psyr_0374 0.75 +0.4 399,506 + Psyr_0374 0.77 -3.1 399,506 + Psyr_0374 0.77 +0.8 399,506 + Psyr_0374 0.77 +0.4 399,507 - Psyr_0374 0.77 -0.0 399,507 - Psyr_0374 0.77 -0.2 399,812 + Psyr_0374 0.90 -1.3 399,813 - Psyr_0374 0.90 -0.8 399,813 - Psyr_0374 0.90 -0.9 399,848 + +2.8 399,848 + +0.3 399,849 - +0.8 399,849 - +0.8 399,849 - -1.6 399,852 - +0.7 399,875 + -0.6 399,876 - +0.3 399,876 - +0.6 399,888 + -1.0 399,888 + -1.2 399,889 - +1.5 399,912 + -0.7 399,990 - +0.3 399,990 - -0.7 399,990 - +1.1 400,078 + +0.7 400,106 + +2.2 400,106 + -1.5 400,107 - -0.2 400,107 - -0.6 400,114 - +0.6 400,114 - +0.4 400,114 - -0.3 400,130 - +0.4 400,130 - +1.4 400,130 - -0.3 400,152 - +1.3 400,163 + -1.9 400,163 + -1.1 400,163 + +1.6 400,163 + -0.3 400,163 + -2.2 400,163 + -1.3 400,163 + -0.2 400,163 + -0.9 400,163 + +0.4 400,163 + +0.2 400,163 + -0.5 400,163 + +0.5 400,163 + +0.8 400,163 + +0.1 400,164 - -0.6 400,164 - +1.1 400,164 - +0.3 400,164 - -0.3 400,287 + -0.5 400,287 + -0.2 400,287 + -3.2 400,287 + -0.6 400,287 + +0.1 400,288 - +0.1 400,307 + +2.1 400,307 + -0.6 400,307 + +0.3 400,307 + -0.3 400,308 - -1.1 400,310 + -1.2 400,310 + +1.0 400,310 + +1.0 400,310 + +0.3 400,310 + -2.1 400,310 + +0.0 400,310 + +0.4 400,311 - -0.1 400,311 - -0.2 400,311 - +1.1 400,311 - -0.2 400,311 - +3.4 400,311 - +0.2 400,311 - +1.0 400,311 - +0.2 400,311 - +0.5 400,311 - +0.1 400,331 + +0.9 400,331 + +0.1 400,331 + +0.4 400,331 + +0.1 400,331 + -2.2 400,342 + +1.0 400,342 + -0.1 400,342 + +0.0 400,342 + -0.1 400,342 + -0.4 400,342 + -2.1 400,342 + -1.1 400,342 + -0.2 400,342 + +0.3 400,342 + +0.5 400,343 - +0.1 400,343 - +0.5 400,343 - +1.4 400,343 - -0.4 400,343 - +1.0 400,343 - +0.7 400,343 - +0.4 400,343 - +1.3 400,343 - -1.0 400,343 - +1.3 400,343 - +1.1 400,415 + -0.4 400,415 + +0.3 400,416 - -1.1 400,416 - -1.0 400,460 - Psyr_0375 0.12 -0.9 400,506 - Psyr_0375 0.17 -0.1 400,506 - Psyr_0375 0.17 -0.4 400,506 - Psyr_0375 0.17 +1.1 400,506 - Psyr_0375 0.17 +0.5 400,697 + Psyr_0375 0.36 +1.0 400,697 + Psyr_0375 0.36 +0.4 400,697 + Psyr_0375 0.36 +0.0 400,697 + Psyr_0375 0.36 -1.7 400,781 + Psyr_0375 0.45 +1.9 400,781 + Psyr_0375 0.45 -1.6 400,814 + Psyr_0375 0.48 -0.8 400,814 + Psyr_0375 0.48 -0.8 400,814 + Psyr_0375 0.48 +0.6 400,815 - Psyr_0375 0.49 +0.7 400,815 - Psyr_0375 0.49 -0.7 400,815 - Psyr_0375 0.49 -0.5 400,826 + Psyr_0375 0.50 +0.5 400,826 + Psyr_0375 0.50 +0.0 400,826 + Psyr_0375 0.50 +0.7 400,826 + Psyr_0375 0.50 -0.8 400,827 - Psyr_0375 0.50 -0.1 400,827 - Psyr_0375 0.50 +0.3 400,827 - Psyr_0375 0.50 +0.1 401,040 - Psyr_0375 0.72 -2.2 401,040 - Psyr_0375 0.72 +0.5 401,040 - Psyr_0375 0.72 -0.4
Or see this region's nucleotide sequence