Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0264 and Psyr_0265 are separated by 53 nucleotides Psyr_0265 and Psyr_0266 are separated by 23 nucleotides
Psyr_0264: Psyr_0264 - Alginate biosynthesis sensor protein KinB, at 280,205 to 281,992
_0264
Psyr_0265: Psyr_0265 - N-acetylmuramoyl-L-alanine amidase, family 2, at 282,046 to 282,897
_0265
Psyr_0266: Psyr_0266 - GGDEF domain protein, at 282,921 to 284,993
_0266
Position (kb) 282
283 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 281.234 kb on + strand, within Psyr_0264 at 281.235 kb on - strand, within Psyr_0264 at 281.623 kb on + strand, within Psyr_0264 at 281.642 kb on - strand, within Psyr_0264 at 281.942 kb on + strand at 281.943 kb on - strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.972 kb on + strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.973 kb on - strand at 281.974 kb on + strand at 281.975 kb on - strand at 282.192 kb on - strand, within Psyr_0265 at 282.369 kb on + strand, within Psyr_0265 at 282.370 kb on - strand, within Psyr_0265 at 282.605 kb on + strand, within Psyr_0265 at 282.605 kb on + strand, within Psyr_0265 at 282.605 kb on + strand, within Psyr_0265 at 282.605 kb on + strand, within Psyr_0265 at 282.605 kb on + strand, within Psyr_0265 at 282.605 kb on + strand, within Psyr_0265 at 282.605 kb on + strand, within Psyr_0265 at 282.605 kb on + strand, within Psyr_0265 at 282.606 kb on - strand, within Psyr_0265 at 282.606 kb on - strand, within Psyr_0265 at 282.606 kb on - strand, within Psyr_0265 at 282.606 kb on - strand, within Psyr_0265 at 282.606 kb on - strand, within Psyr_0265 at 282.606 kb on - strand, within Psyr_0265 at 282.638 kb on + strand, within Psyr_0265 at 282.638 kb on + strand, within Psyr_0265 at 282.639 kb on - strand, within Psyr_0265 at 282.667 kb on + strand, within Psyr_0265 at 282.668 kb on - strand, within Psyr_0265 at 282.668 kb on - strand, within Psyr_0265 at 282.701 kb on + strand, within Psyr_0265 at 282.701 kb on + strand, within Psyr_0265 at 282.701 kb on + strand, within Psyr_0265 at 282.701 kb on + strand, within Psyr_0265 at 282.701 kb on + strand, within Psyr_0265 at 282.701 kb on + strand, within Psyr_0265 at 282.701 kb on + strand, within Psyr_0265 at 282.701 kb on + strand, within Psyr_0265 at 282.701 kb on + strand, within Psyr_0265 at 282.702 kb on - strand, within Psyr_0265 at 282.702 kb on - strand, within Psyr_0265 at 282.702 kb on - strand, within Psyr_0265 at 282.702 kb on - strand, within Psyr_0265 at 282.702 kb on - strand, within Psyr_0265 at 282.702 kb on - strand, within Psyr_0265 at 282.702 kb on - strand, within Psyr_0265 at 282.702 kb on - strand, within Psyr_0265 at 282.702 kb on - strand, within Psyr_0265 at 282.702 kb on - strand, within Psyr_0265 at 282.702 kb on - strand, within Psyr_0265 at 282.716 kb on + strand, within Psyr_0265 at 282.716 kb on + strand, within Psyr_0265 at 282.716 kb on + strand, within Psyr_0265 at 282.716 kb on + strand, within Psyr_0265 at 282.716 kb on + strand, within Psyr_0265 at 282.717 kb on - strand, within Psyr_0265 at 282.717 kb on - strand, within Psyr_0265 at 282.717 kb on - strand, within Psyr_0265 at 282.811 kb on + strand, within Psyr_0265 at 282.811 kb on + strand, within Psyr_0265 at 282.815 kb on + strand at 282.815 kb on + strand at 282.815 kb on + strand at 282.815 kb on + strand at 282.816 kb on - strand at 282.816 kb on - strand at 282.816 kb on - strand at 282.816 kb on - strand at 282.870 kb on + strand at 282.872 kb on + strand at 282.873 kb on - strand at 282.878 kb on + strand at 282.878 kb on + strand at 282.878 kb on + strand at 282.878 kb on + strand at 282.878 kb on + strand at 282.878 kb on + strand at 282.878 kb on + strand at 282.878 kb on + strand at 282.878 kb on + strand at 282.878 kb on + strand at 282.878 kb on + strand at 282.878 kb on + strand at 282.879 kb on - strand at 282.879 kb on - strand at 282.879 kb on - strand at 282.879 kb on - strand at 282.879 kb on - strand at 282.879 kb on - strand at 282.879 kb on - strand at 282.879 kb on - strand at 282.879 kb on - strand at 282.879 kb on - strand at 282.879 kb on - strand at 282.964 kb on + strand at 282.964 kb on + strand at 282.965 kb on - strand at 283.038 kb on + strand at 283.038 kb on + strand at 283.039 kb on - strand at 283.039 kb on - strand at 283.039 kb on - strand at 283.039 kb on - strand at 283.233 kb on + strand, within Psyr_0266 at 283.233 kb on + strand, within Psyr_0266 at 283.234 kb on - strand, within Psyr_0266 at 283.234 kb on - strand, within Psyr_0266 at 283.234 kb on - strand, within Psyr_0266 at 283.535 kb on - strand, within Psyr_0266 at 283.756 kb on + strand, within Psyr_0266 at 283.756 kb on + strand, within Psyr_0266 at 283.756 kb on + strand, within Psyr_0266 at 283.756 kb on + strand, within Psyr_0266 at 283.756 kb on + strand, within Psyr_0266 at 283.757 kb on - strand, within Psyr_0266 at 283.757 kb on - strand, within Psyr_0266 at 283.845 kb on - strand, within Psyr_0266 at 283.863 kb on + strand, within Psyr_0266 at 283.863 kb on + strand, within Psyr_0266 at 283.864 kb on - strand, within Psyr_0266
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 281,234 + Psyr_0264 0.58 +1.2 281,235 - Psyr_0264 0.58 +0.1 281,623 + Psyr_0264 0.79 -0.8 281,642 - Psyr_0264 0.80 +0.0 281,942 + -0.8 281,943 - -0.7 281,972 + -0.1 281,972 + -0.4 281,972 + -0.1 281,972 + +0.5 281,972 + +0.6 281,972 + -1.9 281,972 + +0.1 281,972 + +1.0 281,972 + -1.7 281,972 + -0.6 281,972 + -0.2 281,972 + +1.7 281,972 + -0.1 281,972 + +1.0 281,972 + +0.1 281,972 + +0.3 281,972 + +0.4 281,972 + -0.7 281,972 + +0.1 281,972 + +0.2 281,973 - -0.8 281,973 - -1.1 281,973 - -0.1 281,973 - +0.6 281,973 - +0.2 281,973 - -0.2 281,973 - -3.8 281,973 - -1.1 281,973 - +0.9 281,973 - -1.8 281,973 - -1.4 281,973 - +3.2 281,973 - -0.6 281,973 - -0.5 281,973 - -0.3 281,973 - -0.4 281,973 - -0.8 281,974 + -0.6 281,975 - -0.6 282,192 - Psyr_0265 0.17 -0.3 282,369 + Psyr_0265 0.38 -1.9 282,370 - Psyr_0265 0.38 +0.5 282,605 + Psyr_0265 0.66 +0.2 282,605 + Psyr_0265 0.66 -0.4 282,605 + Psyr_0265 0.66 -0.7 282,605 + Psyr_0265 0.66 +1.1 282,605 + Psyr_0265 0.66 -2.6 282,605 + Psyr_0265 0.66 -1.9 282,605 + Psyr_0265 0.66 -0.1 282,605 + Psyr_0265 0.66 -0.6 282,606 - Psyr_0265 0.66 -0.1 282,606 - Psyr_0265 0.66 +0.1 282,606 - Psyr_0265 0.66 -2.5 282,606 - Psyr_0265 0.66 -1.7 282,606 - Psyr_0265 0.66 -1.6 282,606 - Psyr_0265 0.66 -1.3 282,638 + Psyr_0265 0.69 -0.3 282,638 + Psyr_0265 0.69 +0.9 282,639 - Psyr_0265 0.70 +0.4 282,667 + Psyr_0265 0.73 -1.5 282,668 - Psyr_0265 0.73 -3.0 282,668 - Psyr_0265 0.73 +0.1 282,701 + Psyr_0265 0.77 +0.2 282,701 + Psyr_0265 0.77 +0.5 282,701 + Psyr_0265 0.77 -0.2 282,701 + Psyr_0265 0.77 -2.7 282,701 + Psyr_0265 0.77 +0.6 282,701 + Psyr_0265 0.77 -2.4 282,701 + Psyr_0265 0.77 -1.1 282,701 + Psyr_0265 0.77 -0.4 282,701 + Psyr_0265 0.77 +1.3 282,702 - Psyr_0265 0.77 -0.5 282,702 - Psyr_0265 0.77 -1.4 282,702 - Psyr_0265 0.77 -0.7 282,702 - Psyr_0265 0.77 -0.3 282,702 - Psyr_0265 0.77 -0.8 282,702 - Psyr_0265 0.77 -1.6 282,702 - Psyr_0265 0.77 -1.4 282,702 - Psyr_0265 0.77 -2.9 282,702 - Psyr_0265 0.77 -2.3 282,702 - Psyr_0265 0.77 -0.8 282,702 - Psyr_0265 0.77 -0.6 282,716 + Psyr_0265 0.79 -1.5 282,716 + Psyr_0265 0.79 -0.7 282,716 + Psyr_0265 0.79 -2.8 282,716 + Psyr_0265 0.79 -1.2 282,716 + Psyr_0265 0.79 -0.4 282,717 - Psyr_0265 0.79 -1.5 282,717 - Psyr_0265 0.79 -2.1 282,717 - Psyr_0265 0.79 +1.1 282,811 + Psyr_0265 0.90 -1.0 282,811 + Psyr_0265 0.90 -0.9 282,815 + +0.7 282,815 + -0.2 282,815 + -1.3 282,815 + -1.4 282,816 - -1.0 282,816 - -0.3 282,816 - +0.1 282,816 - -1.2 282,870 + +0.4 282,872 + +3.2 282,873 - -0.0 282,878 + -0.6 282,878 + +1.0 282,878 + -1.0 282,878 + -1.7 282,878 + +0.3 282,878 + -1.1 282,878 + +0.1 282,878 + -0.4 282,878 + -0.3 282,878 + -1.7 282,878 + +0.1 282,878 + -0.8 282,879 - -1.9 282,879 - +2.2 282,879 - +0.4 282,879 - +0.8 282,879 - -0.3 282,879 - -0.7 282,879 - +0.7 282,879 - -0.0 282,879 - +0.9 282,879 - -0.4 282,879 - -0.6 282,964 + -1.9 282,964 + -0.2 282,965 - -1.0 283,038 + -0.7 283,038 + +0.4 283,039 - -1.9 283,039 - +1.1 283,039 - +0.3 283,039 - +0.7 283,233 + Psyr_0266 0.15 -0.1 283,233 + Psyr_0266 0.15 -0.0 283,234 - Psyr_0266 0.15 +0.7 283,234 - Psyr_0266 0.15 -0.3 283,234 - Psyr_0266 0.15 -0.7 283,535 - Psyr_0266 0.30 -1.0 283,756 + Psyr_0266 0.40 +0.4 283,756 + Psyr_0266 0.40 -2.1 283,756 + Psyr_0266 0.40 +1.1 283,756 + Psyr_0266 0.40 +0.6 283,756 + Psyr_0266 0.40 -0.3 283,757 - Psyr_0266 0.40 -0.2 283,757 - Psyr_0266 0.40 +0.3 283,845 - Psyr_0266 0.45 -0.8 283,863 + Psyr_0266 0.45 -0.2 283,863 + Psyr_0266 0.45 +0.2 283,864 - Psyr_0266 0.45 -1.3
Or see this region's nucleotide sequence