Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2001

Experiment: Varel_Bryant_medium_Glucose with Lithocholic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Lithocholic 0.2 mg/ml
2,516,178	-		BT2000	0.82	-0.4
2,516,189	+		BT2000	0.83	+0.2
2,516,190	-		BT2000	0.83	-0.0
2,516,271	-		BT2000	0.89	+0.8
2,516,273	+		BT2000	0.89	+0.0
2,516,274	-		BT2000	0.89	+2.5
2,516,546	-				+0.9
2,516,549	-				+1.2
2,516,644	+				-0.4
2,516,644	+				+0.8
2,516,685	-				-0.9
2,516,804	-				-0.0
2,516,806	-				+0.1
2,516,806	-				+1.1
2,516,852	-				-1.4
2,516,924	-				+0.5
2,516,929	-				-0.0
2,516,932	+				-0.8
2,516,933	-				+0.3
2,516,952	-				-0.2
2,516,985	-				-0.3
2,517,123	-				-0.5
2,517,123	-				-0.5
2,517,144	-				-0.6
2,518,505	-				+0.5
2,518,581	-				-2.2