Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4791
Experiment: KB with Methanol 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KB with Methanol 5 vol% |
---|---|---|---|---|---|
remove | |||||
5,677,384 | - | Psyr_4790 | 0.20 | -1.7 | |
5,678,623 | - | Psyr_4791 | 0.27 | -0.1 | |
5,678,623 | - | Psyr_4791 | 0.27 | -0.1 | |
5,679,174 | - | Psyr_4791 | 0.80 | -1.7 | |
5,679,366 | - | +0.3 | |||
5,679,366 | - | +0.6 | |||
5,679,462 | - | -0.5 | |||
5,679,462 | - | +0.9 | |||
5,679,462 | - | +0.5 | |||
5,679,462 | - | -1.3 | |||
5,679,462 | - | -2.9 | |||
5,679,462 | - | -0.2 | |||
5,679,462 | - | -0.5 | |||
5,679,462 | - | +1.3 | |||
5,679,462 | - | -1.1 |
Or see this region's nucleotide sequence