Experiment: KB with Methanol 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4248 and Psyr_4249 are separated by 689 nucleotides Psyr_4249 and Psyr_4250 overlap by 4 nucleotides Psyr_4250 and Psyr_4251 are separated by 13 nucleotides
Psyr_4248: Psyr_4248 - hypothetical protein, at 5,063,393 to 5,065,867
_4248
Psyr_4249: Psyr_4249 - Glycine betaine/L-proline transport ATP-binding subunit, at 5,066,557 to 5,067,723
_4249
Psyr_4250: Psyr_4250 - Binding-protein-dependent transport systems inner membrane component, at 5,067,720 to 5,068,373
_4250
Psyr_4251: Psyr_4251 - Substrate-binding region of ABC-type glycine betaine transport system, at 5,068,387 to 5,069,280
_4251
Position (kb) 5066
5067
5068 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5065.590 kb on + strand, within Psyr_4248 at 5065.590 kb on + strand, within Psyr_4248 at 5065.590 kb on + strand, within Psyr_4248 at 5065.591 kb on - strand, within Psyr_4248 at 5065.591 kb on - strand, within Psyr_4248 at 5065.591 kb on - strand, within Psyr_4248 at 5065.591 kb on - strand, within Psyr_4248 at 5065.591 kb on - strand, within Psyr_4248 at 5065.591 kb on - strand, within Psyr_4248 at 5065.591 kb on - strand, within Psyr_4248 at 5065.591 kb on - strand, within Psyr_4248 at 5065.592 kb on + strand, within Psyr_4248 at 5065.592 kb on + strand, within Psyr_4248 at 5065.592 kb on + strand, within Psyr_4248 at 5065.593 kb on - strand, within Psyr_4248 at 5065.593 kb on - strand, within Psyr_4248 at 5065.593 kb on - strand, within Psyr_4248 at 5065.625 kb on + strand at 5065.625 kb on + strand at 5065.625 kb on + strand at 5065.625 kb on + strand at 5065.625 kb on + strand at 5065.625 kb on + strand at 5065.626 kb on - strand at 5065.626 kb on - strand at 5065.626 kb on - strand at 5065.626 kb on - strand at 5065.649 kb on + strand at 5065.649 kb on + strand at 5065.649 kb on + strand at 5065.650 kb on - strand at 5065.679 kb on + strand at 5065.679 kb on + strand at 5065.680 kb on - strand at 5065.680 kb on - strand at 5065.682 kb on + strand at 5065.682 kb on + strand at 5065.683 kb on - strand at 5065.744 kb on + strand at 5065.744 kb on + strand at 5065.744 kb on + strand at 5065.745 kb on - strand at 5065.745 kb on - strand at 5065.745 kb on - strand at 5065.784 kb on + strand at 5065.784 kb on + strand at 5065.784 kb on + strand at 5065.784 kb on + strand at 5065.784 kb on + strand at 5065.784 kb on + strand at 5065.785 kb on - strand at 5065.785 kb on - strand at 5065.785 kb on - strand at 5065.785 kb on - strand at 5065.785 kb on - strand at 5065.785 kb on - strand at 5065.785 kb on - strand at 5065.785 kb on - strand at 5065.865 kb on + strand at 5066.063 kb on + strand at 5066.063 kb on + strand at 5066.063 kb on + strand at 5066.064 kb on - strand at 5066.064 kb on - strand at 5066.068 kb on + strand at 5066.068 kb on + strand at 5066.068 kb on + strand at 5066.069 kb on - strand at 5066.069 kb on - strand at 5066.069 kb on - strand at 5066.069 kb on - strand at 5066.069 kb on - strand at 5066.151 kb on + strand at 5066.152 kb on - strand at 5066.177 kb on + strand at 5066.177 kb on + strand at 5066.178 kb on - strand at 5066.201 kb on + strand at 5066.242 kb on - strand at 5066.297 kb on - strand at 5066.301 kb on + strand at 5066.377 kb on + strand at 5066.389 kb on + strand at 5066.389 kb on + strand at 5066.389 kb on + strand at 5066.390 kb on - strand at 5066.390 kb on - strand at 5066.390 kb on - strand at 5066.390 kb on - strand at 5066.390 kb on - strand at 5066.390 kb on - strand at 5066.390 kb on - strand at 5066.475 kb on + strand at 5066.475 kb on + strand at 5066.475 kb on + strand at 5066.475 kb on + strand at 5066.475 kb on + strand at 5066.475 kb on + strand at 5066.475 kb on + strand at 5066.476 kb on - strand at 5066.476 kb on - strand at 5066.476 kb on - strand at 5066.476 kb on - strand at 5066.476 kb on - strand at 5066.476 kb on - strand at 5066.476 kb on - strand at 5066.476 kb on - strand at 5066.505 kb on - strand at 5066.553 kb on + strand at 5066.637 kb on - strand at 5066.674 kb on + strand, within Psyr_4249 at 5066.674 kb on + strand, within Psyr_4249 at 5066.674 kb on + strand, within Psyr_4249 at 5066.674 kb on + strand, within Psyr_4249 at 5066.674 kb on + strand, within Psyr_4249 at 5066.674 kb on + strand, within Psyr_4249 at 5066.674 kb on + strand, within Psyr_4249 at 5066.675 kb on - strand, within Psyr_4249 at 5066.675 kb on - strand, within Psyr_4249 at 5066.675 kb on - strand, within Psyr_4249 at 5066.675 kb on - strand, within Psyr_4249 at 5066.675 kb on - strand, within Psyr_4249 at 5066.675 kb on - strand, within Psyr_4249 at 5066.675 kb on - strand, within Psyr_4249 at 5066.720 kb on + strand, within Psyr_4249 at 5066.720 kb on + strand, within Psyr_4249 at 5066.720 kb on + strand, within Psyr_4249 at 5066.720 kb on + strand, within Psyr_4249 at 5066.721 kb on - strand, within Psyr_4249 at 5066.721 kb on - strand, within Psyr_4249 at 5066.721 kb on - strand, within Psyr_4249 at 5066.721 kb on - strand, within Psyr_4249 at 5066.721 kb on - strand, within Psyr_4249 at 5066.721 kb on - strand, within Psyr_4249 at 5066.834 kb on + strand, within Psyr_4249 at 5066.834 kb on + strand, within Psyr_4249 at 5066.834 kb on + strand, within Psyr_4249 at 5066.834 kb on + strand, within Psyr_4249 at 5066.873 kb on + strand, within Psyr_4249 at 5066.874 kb on - strand, within Psyr_4249 at 5066.874 kb on - strand, within Psyr_4249 at 5066.874 kb on - strand, within Psyr_4249 at 5066.874 kb on - strand, within Psyr_4249 at 5067.329 kb on + strand, within Psyr_4249 at 5067.830 kb on + strand, within Psyr_4250 at 5067.831 kb on - strand, within Psyr_4250 at 5067.831 kb on - strand, within Psyr_4250 at 5067.831 kb on - strand, within Psyr_4250 at 5067.861 kb on + strand, within Psyr_4250 at 5067.862 kb on - strand, within Psyr_4250 at 5067.862 kb on - strand, within Psyr_4250 at 5068.039 kb on - strand, within Psyr_4250 at 5068.057 kb on + strand, within Psyr_4250 at 5068.057 kb on + strand, within Psyr_4250 at 5068.057 kb on + strand, within Psyr_4250 at 5068.057 kb on + strand, within Psyr_4250 at 5068.057 kb on + strand, within Psyr_4250 at 5068.057 kb on + strand, within Psyr_4250 at 5068.057 kb on + strand, within Psyr_4250 at 5068.057 kb on + strand, within Psyr_4250 at 5068.057 kb on + strand, within Psyr_4250 at 5068.057 kb on + strand, within Psyr_4250 at 5068.058 kb on - strand, within Psyr_4250 at 5068.058 kb on - strand, within Psyr_4250 at 5068.058 kb on - strand, within Psyr_4250 at 5068.058 kb on - strand, within Psyr_4250 at 5068.058 kb on - strand, within Psyr_4250 at 5068.058 kb on - strand, within Psyr_4250 at 5068.087 kb on + strand, within Psyr_4250 at 5068.088 kb on - strand, within Psyr_4250 at 5068.144 kb on + strand, within Psyr_4250 at 5068.144 kb on + strand, within Psyr_4250 at 5068.144 kb on + strand, within Psyr_4250 at 5068.145 kb on - strand, within Psyr_4250 at 5068.145 kb on - strand, within Psyr_4250 at 5068.145 kb on - strand, within Psyr_4250 at 5068.373 kb on + strand at 5068.388 kb on + strand at 5068.388 kb on + strand at 5068.388 kb on + strand at 5068.388 kb on + strand at 5068.389 kb on - strand at 5068.389 kb on - strand at 5068.544 kb on + strand, within Psyr_4251 at 5068.544 kb on + strand, within Psyr_4251 at 5068.544 kb on + strand, within Psyr_4251 at 5068.544 kb on + strand, within Psyr_4251 at 5068.545 kb on - strand, within Psyr_4251 at 5068.574 kb on + strand, within Psyr_4251 at 5068.574 kb on + strand, within Psyr_4251 at 5068.586 kb on + strand, within Psyr_4251 at 5068.586 kb on + strand, within Psyr_4251 at 5068.586 kb on + strand, within Psyr_4251 at 5068.586 kb on + strand, within Psyr_4251 at 5068.586 kb on + strand, within Psyr_4251 at 5068.587 kb on - strand, within Psyr_4251 at 5068.587 kb on - strand, within Psyr_4251 at 5068.587 kb on - strand, within Psyr_4251 at 5068.587 kb on - strand, within Psyr_4251 at 5068.587 kb on - strand, within Psyr_4251 at 5068.587 kb on - strand, within Psyr_4251 at 5068.587 kb on - strand, within Psyr_4251 at 5068.587 kb on - strand, within Psyr_4251 at 5068.587 kb on - strand, within Psyr_4251 at 5068.646 kb on + strand, within Psyr_4251 at 5068.646 kb on + strand, within Psyr_4251 at 5068.647 kb on - strand, within Psyr_4251 at 5068.647 kb on - strand, within Psyr_4251 at 5068.647 kb on - strand, within Psyr_4251 at 5068.647 kb on - strand, within Psyr_4251 at 5068.647 kb on - strand, within Psyr_4251 at 5068.688 kb on + strand, within Psyr_4251 at 5068.688 kb on + strand, within Psyr_4251 at 5068.688 kb on + strand, within Psyr_4251 at 5068.689 kb on - strand, within Psyr_4251 at 5068.689 kb on - strand, within Psyr_4251
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Methanol 5 vol% remove 5,065,590 + Psyr_4248 0.89 +0.6 5,065,590 + Psyr_4248 0.89 -0.8 5,065,590 + Psyr_4248 0.89 +0.1 5,065,591 - Psyr_4248 0.89 -0.3 5,065,591 - Psyr_4248 0.89 +0.5 5,065,591 - Psyr_4248 0.89 +1.8 5,065,591 - Psyr_4248 0.89 -1.8 5,065,591 - Psyr_4248 0.89 -0.5 5,065,591 - Psyr_4248 0.89 -0.3 5,065,591 - Psyr_4248 0.89 +0.5 5,065,591 - Psyr_4248 0.89 -0.5 5,065,592 + Psyr_4248 0.89 -0.2 5,065,592 + Psyr_4248 0.89 +0.4 5,065,592 + Psyr_4248 0.89 +1.3 5,065,593 - Psyr_4248 0.89 +2.0 5,065,593 - Psyr_4248 0.89 +0.8 5,065,593 - Psyr_4248 0.89 -0.2 5,065,625 + -0.7 5,065,625 + +0.2 5,065,625 + -0.6 5,065,625 + -2.1 5,065,625 + +0.7 5,065,625 + -0.4 5,065,626 - +0.7 5,065,626 - +1.0 5,065,626 - +2.2 5,065,626 - -0.4 5,065,649 + +0.5 5,065,649 + -0.1 5,065,649 + +0.4 5,065,650 - -1.5 5,065,679 + -2.0 5,065,679 + +0.6 5,065,680 - -0.6 5,065,680 - +2.0 5,065,682 + +0.9 5,065,682 + +1.2 5,065,683 - -0.5 5,065,744 + +0.3 5,065,744 + +1.2 5,065,744 + -2.0 5,065,745 - +0.1 5,065,745 - -0.7 5,065,745 - -0.8 5,065,784 + +1.3 5,065,784 + -1.0 5,065,784 + -0.3 5,065,784 + -0.2 5,065,784 + +0.7 5,065,784 + -2.2 5,065,785 - +0.1 5,065,785 - +1.2 5,065,785 - +1.1 5,065,785 - +0.9 5,065,785 - -2.2 5,065,785 - -2.4 5,065,785 - +2.2 5,065,785 - +0.8 5,065,865 + -0.2 5,066,063 + +0.9 5,066,063 + +3.6 5,066,063 + -0.8 5,066,064 - -0.5 5,066,064 - -0.6 5,066,068 + +0.1 5,066,068 + -2.4 5,066,068 + -3.1 5,066,069 - +1.2 5,066,069 - -0.2 5,066,069 - +1.4 5,066,069 - +0.0 5,066,069 - -1.0 5,066,151 + +1.4 5,066,152 - +1.0 5,066,177 + -0.7 5,066,177 + -0.8 5,066,178 - +2.0 5,066,201 + -0.3 5,066,242 - +0.8 5,066,297 - +0.9 5,066,301 + +0.8 5,066,377 + -0.1 5,066,389 + +1.3 5,066,389 + +1.2 5,066,389 + +0.3 5,066,390 - -0.7 5,066,390 - -0.1 5,066,390 - +0.4 5,066,390 - -0.2 5,066,390 - -1.1 5,066,390 - +0.5 5,066,390 - +1.6 5,066,475 + -1.4 5,066,475 + +1.4 5,066,475 + -0.2 5,066,475 + +0.8 5,066,475 + +0.7 5,066,475 + +0.1 5,066,475 + +1.0 5,066,476 - -0.6 5,066,476 - -0.6 5,066,476 - +0.1 5,066,476 - -2.2 5,066,476 - -0.3 5,066,476 - -0.0 5,066,476 - +0.8 5,066,476 - -1.2 5,066,505 - +0.9 5,066,553 + -0.6 5,066,637 - -0.9 5,066,674 + Psyr_4249 0.10 -1.2 5,066,674 + Psyr_4249 0.10 +1.3 5,066,674 + Psyr_4249 0.10 +2.0 5,066,674 + Psyr_4249 0.10 +1.6 5,066,674 + Psyr_4249 0.10 -1.0 5,066,674 + Psyr_4249 0.10 +1.1 5,066,674 + Psyr_4249 0.10 +1.7 5,066,675 - Psyr_4249 0.10 +0.6 5,066,675 - Psyr_4249 0.10 +0.4 5,066,675 - Psyr_4249 0.10 +0.9 5,066,675 - Psyr_4249 0.10 -0.4 5,066,675 - Psyr_4249 0.10 -1.3 5,066,675 - Psyr_4249 0.10 -0.4 5,066,675 - Psyr_4249 0.10 +0.1 5,066,720 + Psyr_4249 0.14 +0.4 5,066,720 + Psyr_4249 0.14 +1.0 5,066,720 + Psyr_4249 0.14 -0.2 5,066,720 + Psyr_4249 0.14 +0.5 5,066,721 - Psyr_4249 0.14 +0.1 5,066,721 - Psyr_4249 0.14 +1.1 5,066,721 - Psyr_4249 0.14 -0.5 5,066,721 - Psyr_4249 0.14 +0.8 5,066,721 - Psyr_4249 0.14 -0.6 5,066,721 - Psyr_4249 0.14 +0.6 5,066,834 + Psyr_4249 0.24 +0.2 5,066,834 + Psyr_4249 0.24 +0.5 5,066,834 + Psyr_4249 0.24 +0.2 5,066,834 + Psyr_4249 0.24 +0.7 5,066,873 + Psyr_4249 0.27 +0.3 5,066,874 - Psyr_4249 0.27 +1.2 5,066,874 - Psyr_4249 0.27 +0.7 5,066,874 - Psyr_4249 0.27 -0.2 5,066,874 - Psyr_4249 0.27 -1.1 5,067,329 + Psyr_4249 0.66 +0.1 5,067,830 + Psyr_4250 0.17 +0.1 5,067,831 - Psyr_4250 0.17 +1.0 5,067,831 - Psyr_4250 0.17 -1.5 5,067,831 - Psyr_4250 0.17 -0.0 5,067,861 + Psyr_4250 0.22 -1.0 5,067,862 - Psyr_4250 0.22 +0.0 5,067,862 - Psyr_4250 0.22 -3.1 5,068,039 - Psyr_4250 0.49 -0.2 5,068,057 + Psyr_4250 0.52 +0.7 5,068,057 + Psyr_4250 0.52 -0.3 5,068,057 + Psyr_4250 0.52 -2.1 5,068,057 + Psyr_4250 0.52 +0.2 5,068,057 + Psyr_4250 0.52 -0.2 5,068,057 + Psyr_4250 0.52 +0.6 5,068,057 + Psyr_4250 0.52 +0.7 5,068,057 + Psyr_4250 0.52 +0.1 5,068,057 + Psyr_4250 0.52 -0.6 5,068,057 + Psyr_4250 0.52 +0.4 5,068,058 - Psyr_4250 0.52 -0.3 5,068,058 - Psyr_4250 0.52 +1.5 5,068,058 - Psyr_4250 0.52 +1.6 5,068,058 - Psyr_4250 0.52 +0.6 5,068,058 - Psyr_4250 0.52 +0.6 5,068,058 - Psyr_4250 0.52 +1.6 5,068,087 + Psyr_4250 0.56 +0.2 5,068,088 - Psyr_4250 0.56 -0.9 5,068,144 + Psyr_4250 0.65 +0.4 5,068,144 + Psyr_4250 0.65 +1.4 5,068,144 + Psyr_4250 0.65 -0.2 5,068,145 - Psyr_4250 0.65 +0.9 5,068,145 - Psyr_4250 0.65 -1.8 5,068,145 - Psyr_4250 0.65 +0.1 5,068,373 + +0.6 5,068,388 + +0.4 5,068,388 + +0.0 5,068,388 + +1.2 5,068,388 + +0.8 5,068,389 - -0.5 5,068,389 - +1.2 5,068,544 + Psyr_4251 0.18 +1.2 5,068,544 + Psyr_4251 0.18 +0.9 5,068,544 + Psyr_4251 0.18 +0.5 5,068,544 + Psyr_4251 0.18 -0.6 5,068,545 - Psyr_4251 0.18 -1.7 5,068,574 + Psyr_4251 0.21 -2.2 5,068,574 + Psyr_4251 0.21 +0.7 5,068,586 + Psyr_4251 0.22 +0.6 5,068,586 + Psyr_4251 0.22 +1.1 5,068,586 + Psyr_4251 0.22 -1.2 5,068,586 + Psyr_4251 0.22 +1.0 5,068,586 + Psyr_4251 0.22 -0.4 5,068,587 - Psyr_4251 0.22 +1.7 5,068,587 - Psyr_4251 0.22 +1.2 5,068,587 - Psyr_4251 0.22 +1.2 5,068,587 - Psyr_4251 0.22 -0.1 5,068,587 - Psyr_4251 0.22 -1.2 5,068,587 - Psyr_4251 0.22 -0.3 5,068,587 - Psyr_4251 0.22 +1.4 5,068,587 - Psyr_4251 0.22 -0.6 5,068,587 - Psyr_4251 0.22 -0.9 5,068,646 + Psyr_4251 0.29 +1.7 5,068,646 + Psyr_4251 0.29 -0.7 5,068,647 - Psyr_4251 0.29 +0.2 5,068,647 - Psyr_4251 0.29 -2.7 5,068,647 - Psyr_4251 0.29 -2.7 5,068,647 - Psyr_4251 0.29 +0.1 5,068,647 - Psyr_4251 0.29 -3.2 5,068,688 + Psyr_4251 0.34 -0.2 5,068,688 + Psyr_4251 0.34 -0.2 5,068,688 + Psyr_4251 0.34 -1.3 5,068,689 - Psyr_4251 0.34 +0.5 5,068,689 - Psyr_4251 0.34 -0.4
Or see this region's nucleotide sequence