Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3950

Experiment: KB with Methanol 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Methanol 5 vol%
4,697,037	+				+0.4
4,697,038	-				-0.8
4,697,216	+		Psyr_3949	0.25	+2.4
4,697,216	+		Psyr_3949	0.25	+0.7
4,697,216	+		Psyr_3949	0.25	-1.2
4,697,217	-		Psyr_3949	0.25	-2.3
4,697,217	-		Psyr_3949	0.25	-1.0
4,697,252	+		Psyr_3949	0.30	-0.8
4,697,252	+		Psyr_3949	0.30	-0.4
4,697,253	-		Psyr_3949	0.30	+2.2
4,697,253	-		Psyr_3949	0.30	+0.7
4,697,253	-		Psyr_3949	0.30	-0.1
4,697,399	+		Psyr_3949	0.51	+0.0
4,697,465	+		Psyr_3949	0.61	+0.9
4,697,465	+				+1.7
4,697,465	+		Psyr_3949	0.61	-1.0
4,697,466	-		Psyr_3949	0.61	-0.8
4,697,466	-		Psyr_3949	0.61	+0.2
4,697,466	-		Psyr_3949	0.61	-0.5
4,697,702	+				+0.4
4,697,702	+				+0.5
4,697,702	+				-1.3
4,697,702	+				-1.6
4,697,702	+				-0.4
4,697,702	+				+0.2
4,697,702	+				-0.2
4,697,702	+				+0.6
4,697,702	+				+0.4
4,697,702	+				+0.7
4,697,702	+				-0.7
4,697,703	-				-1.6
4,697,703	-				+0.3
4,697,703	-				+0.4
4,697,703	-				-1.4
4,697,703	-				-0.7
4,697,703	-				-1.4
4,697,793	-				-2.7
4,697,793	-				+1.3
4,698,792	-		Psyr_3951	0.15	-1.6
4,699,452	-		Psyr_3952	0.21	-1.7
4,699,514	-		Psyr_3952	0.38	-0.6
4,699,554	-		Psyr_3952	0.48	-2.3
4,699,635	-		Psyr_3952	0.70	+0.2
4,699,635	-		Psyr_3952	0.70	-1.1
4,699,644	-		Psyr_3952	0.72	+0.2