Experiment: KB with Methanol 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2470 and Psyr_2471 are separated by 775 nucleotides Psyr_2471 and Psyr_2472 are separated by 30 nucleotides Psyr_2472 and Psyr_2473 are separated by 165 nucleotides
Psyr_2470: Psyr_2470 - isovaleryl-CoA dehydrogenase, at 2,863,272 to 2,864,435
_2470
Psyr_2471: Psyr_2471 - hydroxymethylglutaryl-CoA lyase, at 2,865,211 to 2,866,110
_2471
Psyr_2472: Psyr_2472 - transcriptional regulator, MerR family, at 2,866,141 to 2,866,533
_2472
Psyr_2473: Psyr_2473 - transcriptional regulator, LysR family, at 2,866,699 to 2,867,628
_2473
Position (kb)
2865
2866
2867 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2864.504 kb on + strand at 2864.504 kb on + strand at 2864.504 kb on + strand at 2864.504 kb on + strand at 2864.504 kb on + strand at 2864.505 kb on - strand at 2864.505 kb on - strand at 2864.505 kb on - strand at 2864.505 kb on - strand at 2864.678 kb on + strand at 2864.678 kb on + strand at 2864.679 kb on - strand at 2864.679 kb on - strand at 2864.679 kb on - strand at 2864.679 kb on - strand at 2864.679 kb on - strand at 2864.904 kb on + strand at 2864.904 kb on + strand at 2864.926 kb on + strand at 2864.926 kb on + strand at 2864.930 kb on + strand at 2864.930 kb on + strand at 2864.930 kb on + strand at 2864.930 kb on + strand at 2864.930 kb on + strand at 2864.931 kb on - strand at 2864.931 kb on - strand at 2864.956 kb on + strand at 2864.956 kb on + strand at 2864.956 kb on + strand at 2864.957 kb on - strand at 2864.971 kb on - strand at 2865.005 kb on - strand at 2865.015 kb on + strand at 2865.015 kb on + strand at 2865.015 kb on + strand at 2865.016 kb on - strand at 2865.025 kb on - strand at 2865.026 kb on + strand at 2865.026 kb on + strand at 2865.026 kb on + strand at 2865.026 kb on + strand at 2865.026 kb on + strand at 2865.026 kb on + strand at 2865.027 kb on - strand at 2865.027 kb on - strand at 2865.027 kb on - strand at 2865.162 kb on + strand at 2865.162 kb on + strand at 2865.162 kb on + strand at 2865.163 kb on - strand at 2865.163 kb on - strand at 2865.163 kb on - strand at 2865.193 kb on + strand at 2865.342 kb on - strand, within Psyr_2471 at 2865.452 kb on + strand, within Psyr_2471 at 2865.453 kb on - strand, within Psyr_2471 at 2865.453 kb on - strand, within Psyr_2471 at 2865.476 kb on + strand, within Psyr_2471 at 2866.125 kb on - strand at 2866.125 kb on - strand at 2866.316 kb on + strand, within Psyr_2472 at 2866.317 kb on - strand, within Psyr_2472 at 2866.409 kb on + strand, within Psyr_2472 at 2866.410 kb on - strand, within Psyr_2472 at 2866.410 kb on - strand, within Psyr_2472 at 2866.410 kb on - strand, within Psyr_2472 at 2866.410 kb on - strand, within Psyr_2472 at 2866.410 kb on - strand, within Psyr_2472 at 2866.410 kb on - strand, within Psyr_2472 at 2866.413 kb on + strand, within Psyr_2472 at 2866.414 kb on - strand, within Psyr_2472 at 2866.414 kb on - strand, within Psyr_2472 at 2866.414 kb on - strand, within Psyr_2472 at 2866.414 kb on - strand, within Psyr_2472 at 2866.414 kb on - strand, within Psyr_2472 at 2866.414 kb on - strand, within Psyr_2472 at 2866.414 kb on - strand, within Psyr_2472 at 2866.414 kb on - strand, within Psyr_2472 at 2866.414 kb on - strand, within Psyr_2472 at 2866.414 kb on - strand, within Psyr_2472 at 2866.518 kb on - strand at 2866.518 kb on - strand at 2866.552 kb on - strand at 2866.552 kb on - strand at 2866.553 kb on + strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.850 kb on + strand, within Psyr_2473 at 2866.850 kb on + strand, within Psyr_2473 at 2866.856 kb on + strand, within Psyr_2473 at 2866.856 kb on + strand, within Psyr_2473 at 2866.856 kb on + strand, within Psyr_2473 at 2866.856 kb on + strand, within Psyr_2473 at 2866.856 kb on + strand, within Psyr_2473 at 2866.857 kb on - strand, within Psyr_2473 at 2866.857 kb on - strand, within Psyr_2473 at 2866.857 kb on - strand, within Psyr_2473 at 2866.857 kb on - strand, within Psyr_2473 at 2866.857 kb on - strand, within Psyr_2473 at 2866.857 kb on - strand, within Psyr_2473 at 2866.940 kb on + strand, within Psyr_2473 at 2866.940 kb on + strand, within Psyr_2473 at 2866.940 kb on + strand, within Psyr_2473 at 2866.940 kb on + strand, within Psyr_2473 at 2866.940 kb on + strand, within Psyr_2473 at 2866.940 kb on + strand, within Psyr_2473 at 2866.940 kb on + strand, within Psyr_2473 at 2866.940 kb on + strand, within Psyr_2473 at 2866.940 kb on + strand, within Psyr_2473 at 2866.941 kb on - strand, within Psyr_2473 at 2866.941 kb on - strand, within Psyr_2473 at 2866.941 kb on - strand, within Psyr_2473 at 2866.941 kb on - strand, within Psyr_2473 at 2866.941 kb on - strand, within Psyr_2473 at 2867.031 kb on + strand, within Psyr_2473 at 2867.031 kb on + strand, within Psyr_2473 at 2867.037 kb on + strand, within Psyr_2473 at 2867.038 kb on - strand, within Psyr_2473
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Methanol 5 vol% remove 2,864,504 + +3.2 2,864,504 + -0.3 2,864,504 + +0.6 2,864,504 + -1.6 2,864,504 + -1.4 2,864,505 - -0.3 2,864,505 - -0.2 2,864,505 - +0.8 2,864,505 - +0.1 2,864,678 + -3.2 2,864,678 + -2.8 2,864,679 - +1.3 2,864,679 - +0.6 2,864,679 - +0.3 2,864,679 - +0.2 2,864,679 - +1.0 2,864,904 + -1.9 2,864,904 + +0.8 2,864,926 + -1.2 2,864,926 + +1.6 2,864,930 + -0.1 2,864,930 + -0.3 2,864,930 + -2.0 2,864,930 + -1.4 2,864,930 + +1.3 2,864,931 - -0.1 2,864,931 - -0.1 2,864,956 + -1.8 2,864,956 + -1.8 2,864,956 + -0.6 2,864,957 - -0.0 2,864,971 - +0.2 2,865,005 - +0.1 2,865,015 + -2.2 2,865,015 + -0.8 2,865,015 + -0.4 2,865,016 - +1.3 2,865,025 - +1.6 2,865,026 + +1.2 2,865,026 + -2.2 2,865,026 + +0.5 2,865,026 + +0.2 2,865,026 + -0.6 2,865,026 + -0.4 2,865,027 - -0.8 2,865,027 - +0.4 2,865,027 - +0.1 2,865,162 + +1.2 2,865,162 + +2.0 2,865,162 + -0.2 2,865,163 - -0.4 2,865,163 - -0.9 2,865,163 - -2.2 2,865,193 + +2.2 2,865,342 - Psyr_2471 0.15 -3.3 2,865,452 + Psyr_2471 0.27 -3.0 2,865,453 - Psyr_2471 0.27 -3.1 2,865,453 - Psyr_2471 0.27 -0.4 2,865,476 + Psyr_2471 0.29 -1.4 2,866,125 - +0.1 2,866,125 - -0.2 2,866,316 + Psyr_2472 0.45 -1.4 2,866,317 - Psyr_2472 0.45 +0.4 2,866,409 + Psyr_2472 0.68 -1.8 2,866,410 - Psyr_2472 0.68 -1.3 2,866,410 - Psyr_2472 0.68 -0.2 2,866,410 - Psyr_2472 0.68 -1.4 2,866,410 - Psyr_2472 0.68 -1.4 2,866,410 - Psyr_2472 0.68 -0.0 2,866,410 - Psyr_2472 0.68 +0.7 2,866,413 + Psyr_2472 0.69 -1.2 2,866,414 - Psyr_2472 0.69 -2.0 2,866,414 - Psyr_2472 0.69 +1.1 2,866,414 - Psyr_2472 0.69 -0.9 2,866,414 - Psyr_2472 0.69 +0.6 2,866,414 - Psyr_2472 0.69 +0.2 2,866,414 - Psyr_2472 0.69 +2.0 2,866,414 - Psyr_2472 0.69 +2.2 2,866,414 - Psyr_2472 0.69 +0.4 2,866,414 - Psyr_2472 0.69 +1.4 2,866,414 - Psyr_2472 0.69 -1.2 2,866,518 - -2.3 2,866,518 - -1.0 2,866,552 - +0.6 2,866,552 - -0.0 2,866,553 + -3.2 2,866,554 - -2.6 2,866,554 - -0.9 2,866,554 - -2.4 2,866,554 - -1.8 2,866,554 - -0.1 2,866,554 - -1.9 2,866,554 - -1.8 2,866,850 + Psyr_2473 0.16 -1.9 2,866,850 + Psyr_2473 0.16 -1.1 2,866,856 + Psyr_2473 0.17 -1.4 2,866,856 + Psyr_2473 0.17 +0.6 2,866,856 + Psyr_2473 0.17 +0.7 2,866,856 + Psyr_2473 0.17 +0.1 2,866,856 + Psyr_2473 0.17 -1.7 2,866,857 - Psyr_2473 0.17 +0.6 2,866,857 - Psyr_2473 0.17 +0.9 2,866,857 - Psyr_2473 0.17 +1.4 2,866,857 - Psyr_2473 0.17 -2.2 2,866,857 - Psyr_2473 0.17 +0.7 2,866,857 - Psyr_2473 0.17 -0.7 2,866,940 + Psyr_2473 0.26 +0.6 2,866,940 + Psyr_2473 0.26 -2.0 2,866,940 + Psyr_2473 0.26 +0.3 2,866,940 + Psyr_2473 0.26 -1.4 2,866,940 + Psyr_2473 0.26 -0.8 2,866,940 + Psyr_2473 0.26 +0.6 2,866,940 + Psyr_2473 0.26 -2.0 2,866,940 + Psyr_2473 0.26 -0.5 2,866,940 + Psyr_2473 0.26 -1.2 2,866,941 - Psyr_2473 0.26 +1.3 2,866,941 - Psyr_2473 0.26 +1.2 2,866,941 - Psyr_2473 0.26 -0.4 2,866,941 - Psyr_2473 0.26 +0.3 2,866,941 - Psyr_2473 0.26 -1.1 2,867,031 + Psyr_2473 0.36 -1.1 2,867,031 + Psyr_2473 0.36 +0.9 2,867,037 + Psyr_2473 0.36 -1.3 2,867,038 - Psyr_2473 0.36 -1.7
Or see this region's nucleotide sequence