Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2419

Experiment: KB with Methanol 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Methanol 5 vol%
2,800,550	+				+0.3
2,800,550	+				+1.0
2,800,550	+				-0.2
2,800,550	+				+0.9
2,800,551	-				-0.3
2,800,551	-				+0.9
2,800,551	-				-0.2
2,800,600	+				-0.3
2,800,600	+				+1.2
2,800,600	+				-2.4
2,800,600	+				-0.3
2,800,600	+				-1.0
2,800,600	+				+1.5
2,800,601	-				+0.7
2,800,601	-				-0.4
2,800,601	-				-0.0
2,800,601	-				+2.2
2,800,614	+				-0.1
2,800,615	-				+0.1
2,800,615	-				-0.4
2,800,615	-				+0.6
2,800,639	-				-0.4
2,800,643	+				+0.9
2,800,643	+				+0.8
2,800,644	-				-0.8
2,800,644	-				-1.7
2,800,652	-				+0.0
2,800,652	-				-1.9
2,800,707	-				+0.6
2,800,707	-				-0.6
2,800,720	+				-2.4
2,800,721	-				-1.4
2,800,773	-				+1.4
2,800,783	-		Psyr_2418	0.11	-0.1
2,800,793	-		Psyr_2418	0.12	-0.2
2,800,806	+		Psyr_2418	0.14	-1.2
2,800,807	-		Psyr_2418	0.14	+0.8
2,800,809	+		Psyr_2418	0.14	+1.1
2,800,809	+		Psyr_2418	0.14	-0.3
2,800,810	-		Psyr_2418	0.14	+0.6
2,800,810	-		Psyr_2418	0.14	+1.2
2,800,964	+		Psyr_2418	0.33	+0.8
2,801,010	+		Psyr_2418	0.39	-0.2
2,801,010	+		Psyr_2418	0.39	+0.8
2,801,010	+		Psyr_2418	0.39	-0.1
2,801,010	+		Psyr_2418	0.39	+1.3
2,801,010	+		Psyr_2418	0.39	+1.1
2,801,011	-		Psyr_2418	0.39	+0.8
2,801,011	-		Psyr_2418	0.39	-0.9
2,801,442	+				+1.7
2,801,442	+				+0.1
2,801,443	-				-1.0
2,801,443	-				-0.5
2,801,473	-				-0.1
2,801,532	-				-0.6
2,801,703	-		Psyr_2419	0.26	-0.2
2,801,703	-		Psyr_2419	0.26	+0.5
2,801,703	-		Psyr_2419	0.26	-1.8
2,801,879	-		Psyr_2419	0.52	-1.0
2,801,879	-		Psyr_2419	0.52	-1.6
2,802,328	-				-0.7
2,802,328	-				-0.1
2,802,328	-				+0.2
2,802,329	+				-1.3
2,802,329	+				+0.0
2,802,330	-				+1.1
2,802,353	+				-1.8
2,802,353	+				+3.1
2,802,354	-				-0.0
2,802,354	-				-1.5
2,802,354	-				-2.0
2,802,354	-				-2.8
2,802,364	+				+2.6
2,802,364	+				+0.6
2,802,365	-				-2.6
2,802,365	-				-3.0
2,802,365	-				+0.4
2,802,374	+				-0.4
2,802,594	-		Psyr_2420	0.46	+1.1
2,802,594	-		Psyr_2420	0.46	+0.6
2,802,755	+		Psyr_2420	0.78	-0.0
2,802,756	-		Psyr_2420	0.78	+1.6
2,802,756	-		Psyr_2420	0.78	+1.5
2,802,756	-		Psyr_2420	0.78	+1.1
2,802,767	+		Psyr_2420	0.80	+0.8
2,802,767	+		Psyr_2420	0.80	-1.3
2,802,807	-		Psyr_2420	0.88	+1.2
2,802,917	-				-1.5
2,802,917	-				-3.5
2,802,917	-				+0.0
2,802,934	+				+0.4
2,803,087	+				+1.0
2,803,088	-				+0.8
2,803,088	-				+1.9
2,803,147	+				-1.0
2,803,148	-				-0.3
2,803,148	-				-1.8