Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2328

Experiment: KB with Methanol 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Methanol 5 vol%
2,704,492	+		Psyr_2327	0.38	-3.1
2,704,492	+		Psyr_2327	0.38	-0.4
2,704,686	+		Psyr_2327	0.57	-0.5
2,704,687	-		Psyr_2327	0.57	-0.8
2,704,687	-		Psyr_2327	0.57	-0.5
2,704,891	-		Psyr_2327	0.78	+0.2
2,704,891	-		Psyr_2327	0.78	+0.1
2,705,023	+				-1.4
2,705,023	+				+1.4
2,705,024	-				+1.5
2,705,078	+				-0.1
2,705,078	+				-1.8
2,705,079	-				-0.2
2,705,079	-				+2.8
2,705,079	-				-2.2
2,705,079	-				-0.5
2,705,079	-				-3.2
2,705,079	-				-4.1
2,705,124	+				+2.5
2,705,125	-				+0.9
2,705,125	-				-0.1
2,705,125	-				-1.7
2,705,125	-				+0.0
2,705,128	+				+1.1
2,705,128	+				+1.2
2,705,129	-				-0.5
2,705,143	+				-1.4
2,705,143	+				-2.9
2,705,144	-				-0.4
2,705,144	-				+0.8
2,705,144	-				-1.2
2,705,171	-				-0.3
2,705,251	+				-2.0
2,705,251	+				-2.5
2,705,251	+				-3.6
2,705,251	+				-1.5
2,705,251	+				-0.8
2,705,251	+				-0.4
2,705,252	-				-3.8
2,705,252	-				-0.4
2,705,252	-				-0.3
2,705,335	+				+1.1
2,705,335	+				-1.4
2,705,539	+		Psyr_2328	0.12	+0.5
2,705,540	-		Psyr_2328	0.12	+0.1
2,705,542	+		Psyr_2328	0.12	-0.7
2,705,542	+		Psyr_2328	0.12	-1.5
2,705,543	-		Psyr_2328	0.12	-0.3
2,705,692	+		Psyr_2328	0.23	+1.4
2,705,692	+		Psyr_2328	0.23	+0.5
2,705,693	-		Psyr_2328	0.23	-3.2
2,705,693	-		Psyr_2328	0.23	+1.6
2,705,693	-		Psyr_2328	0.23	+1.2
2,705,858	+		Psyr_2328	0.36	-1.2
2,705,858	+		Psyr_2328	0.36	-3.4
2,705,858	+		Psyr_2328	0.36	-0.5
2,705,858	+		Psyr_2328	0.36	+2.7
2,705,858	+		Psyr_2328	0.36	+1.2
2,705,859	-		Psyr_2328	0.36	-1.3
2,705,916	+		Psyr_2328	0.40	+0.2
2,705,916	+		Psyr_2328	0.40	-1.3
2,705,916	+		Psyr_2328	0.40	+0.5
2,705,916	+		Psyr_2328	0.40	-0.6
2,705,916	+		Psyr_2328	0.40	+0.8
2,705,917	-		Psyr_2328	0.40	+1.2
2,705,917	-		Psyr_2328	0.40	+0.5
2,705,917	-		Psyr_2328	0.40	+0.0
2,705,917	-		Psyr_2328	0.40	-0.7
2,705,991	+		Psyr_2328	0.45	+1.2
2,705,991	+		Psyr_2328	0.45	+1.5
2,705,992	-		Psyr_2328	0.46	+1.6
2,705,995	+		Psyr_2328	0.46	+0.1
2,705,995	+		Psyr_2328	0.46	-3.6
2,705,996	-		Psyr_2328	0.46	+2.5
2,705,996	-		Psyr_2328	0.46	+0.3
2,706,388	+		Psyr_2328	0.75	+0.2
2,706,388	+		Psyr_2328	0.75	-0.6
2,706,388	+		Psyr_2328	0.75	-2.1
2,706,388	+		Psyr_2328	0.75	+0.2
2,706,388	+		Psyr_2328	0.75	+1.3
2,706,388	+		Psyr_2328	0.75	+0.8
2,706,389	-		Psyr_2328	0.75	+0.1
2,706,389	-		Psyr_2328	0.75	+0.7
2,706,389	-		Psyr_2328	0.75	-2.3
2,706,389	-		Psyr_2328	0.75	+0.4
2,706,389	-		Psyr_2328	0.75	+0.5
2,706,389	-		Psyr_2328	0.75	+0.8
2,706,389	-		Psyr_2328	0.75	+1.5
2,706,448	+		Psyr_2328	0.79	+1.8
2,706,495	-		Psyr_2328	0.83	-0.2
2,706,658	+				+1.9
2,706,658	+				-1.6
2,706,659	-				+1.3
2,706,659	-				+1.8
2,706,665	-				+0.8
2,706,678	+				-0.8
2,706,716	+				-0.0
2,706,717	-				+0.6
2,706,717	-				-1.1
2,706,725	+				+0.8
2,706,725	+				+0.5
2,706,726	-				+0.6
2,706,795	+				-1.3
2,706,795	+				+1.7
2,706,796	-				-0.5
2,706,839	-				-2.0
2,706,839	-				+0.2
2,706,966	+				-1.9
2,706,966	+				-1.2
2,706,966	+				-0.1
2,706,966	+				+0.5
2,706,967	-				-0.1
2,706,967	-				+0.5
2,707,084	-		Psyr_2329	0.20	-0.8
2,707,179	+		Psyr_2329	0.29	+0.9
2,707,293	+		Psyr_2329	0.40	-1.6
2,707,293	+		Psyr_2329	0.40	+2.3
2,707,293	+		Psyr_2329	0.40	-0.6
2,707,294	-		Psyr_2329	0.40	+0.0
2,707,294	-		Psyr_2329	0.40	+0.7
2,707,294	-		Psyr_2329	0.40	+0.3
2,707,385	+		Psyr_2329	0.48	+0.8
2,707,385	+		Psyr_2329	0.48	-0.2
2,707,386	-		Psyr_2329	0.49	-0.4
2,707,386	-		Psyr_2329	0.49	+2.3
2,707,386	-		Psyr_2329	0.49	-0.2
2,707,386	-		Psyr_2329	0.49	+0.0
2,707,519	-		Psyr_2329	0.61	-0.4
2,707,519	-		Psyr_2329	0.61	+2.6
2,707,644	+		Psyr_2329	0.73	+2.5