Experiment: KB with Methanol 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0767 and Psyr_0768 are separated by 168 nucleotides Psyr_0768 and Psyr_0769 are separated by 201 nucleotides Psyr_0769 and Psyr_0770 are separated by 14 nucleotides Psyr_0770 and Psyr_0771 are separated by 264 nucleotides
Psyr_0767: Psyr_0767 - transcriptional regulator, LysR family, at 872,972 to 873,892
_0767
Psyr_0768: Psyr_0768 - conserved hypothetical protein, at 874,061 to 874,216
_0768
Psyr_0769: Psyr_0769 - conserved hypothetical membrane-anchored protein, at 874,418 to 874,861
_0769
Psyr_0770: Psyr_0770 - conserved hypothetical protein, at 874,876 to 875,334
_0770
Psyr_0771: Psyr_0771 - acetylornithine deacetylase, at 875,599 to 876,741
_0771
Position (kb) 874
875 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 873.439 kb on + strand, within Psyr_0767 at 873.446 kb on - strand, within Psyr_0767 at 873.753 kb on + strand, within Psyr_0767 at 873.754 kb on - strand, within Psyr_0767 at 873.779 kb on + strand, within Psyr_0767 at 873.779 kb on + strand, within Psyr_0767 at 873.779 kb on + strand, within Psyr_0767 at 873.779 kb on + strand, within Psyr_0767 at 873.780 kb on - strand, within Psyr_0767 at 873.780 kb on - strand, within Psyr_0767 at 873.780 kb on - strand, within Psyr_0767 at 873.780 kb on - strand, within Psyr_0767 at 873.780 kb on - strand, within Psyr_0767 at 873.780 kb on - strand, within Psyr_0767 at 873.780 kb on - strand, within Psyr_0767 at 873.780 kb on - strand, within Psyr_0767 at 873.780 kb on - strand, within Psyr_0767 at 874.075 kb on + strand at 874.076 kb on - strand at 874.076 kb on - strand at 874.076 kb on - strand at 874.076 kb on - strand at 874.076 kb on - strand at 874.165 kb on + strand, within Psyr_0768 at 874.214 kb on + strand at 874.214 kb on + strand at 874.215 kb on - strand at 874.431 kb on - strand at 874.440 kb on - strand at 874.440 kb on - strand at 874.440 kb on - strand at 874.658 kb on + strand, within Psyr_0769 at 874.658 kb on + strand, within Psyr_0769 at 874.658 kb on + strand, within Psyr_0769 at 874.659 kb on - strand, within Psyr_0769 at 874.659 kb on - strand, within Psyr_0769 at 874.772 kb on - strand, within Psyr_0769 at 874.772 kb on - strand, within Psyr_0769 at 874.830 kb on + strand at 874.830 kb on + strand at 874.831 kb on - strand at 874.861 kb on + strand at 874.861 kb on + strand at 874.861 kb on + strand at 874.861 kb on + strand at 874.861 kb on + strand at 874.862 kb on - strand at 874.862 kb on - strand at 874.862 kb on - strand at 874.884 kb on - strand at 874.884 kb on - strand at 874.887 kb on + strand at 874.887 kb on + strand at 874.887 kb on + strand at 874.887 kb on + strand at 874.888 kb on - strand at 874.888 kb on - strand at 874.888 kb on - strand at 874.923 kb on + strand, within Psyr_0770 at 874.923 kb on + strand, within Psyr_0770 at 874.923 kb on + strand, within Psyr_0770 at 874.923 kb on + strand, within Psyr_0770 at 874.923 kb on + strand, within Psyr_0770 at 874.924 kb on - strand, within Psyr_0770 at 874.924 kb on - strand, within Psyr_0770 at 874.924 kb on - strand, within Psyr_0770 at 874.924 kb on - strand, within Psyr_0770 at 874.973 kb on + strand, within Psyr_0770 at 874.973 kb on + strand, within Psyr_0770 at 874.973 kb on + strand, within Psyr_0770 at 874.974 kb on - strand, within Psyr_0770 at 874.984 kb on + strand, within Psyr_0770 at 875.075 kb on - strand, within Psyr_0770 at 875.183 kb on + strand, within Psyr_0770 at 875.183 kb on + strand, within Psyr_0770 at 875.184 kb on - strand, within Psyr_0770 at 875.184 kb on - strand, within Psyr_0770 at 875.269 kb on + strand, within Psyr_0770 at 875.269 kb on + strand, within Psyr_0770 at 875.275 kb on + strand, within Psyr_0770 at 875.275 kb on + strand, within Psyr_0770 at 875.275 kb on + strand, within Psyr_0770 at 875.276 kb on - strand, within Psyr_0770 at 875.276 kb on - strand, within Psyr_0770 at 875.276 kb on - strand, within Psyr_0770 at 875.334 kb on + strand at 875.335 kb on - strand at 875.433 kb on - strand at 875.433 kb on - strand at 875.441 kb on + strand at 875.441 kb on + strand at 875.442 kb on - strand at 875.442 kb on - strand at 875.442 kb on - strand at 875.442 kb on - strand at 875.442 kb on - strand at 875.442 kb on - strand at 875.444 kb on + strand at 875.445 kb on - strand at 875.478 kb on + strand at 875.478 kb on + strand at 875.478 kb on + strand at 875.479 kb on - strand at 875.479 kb on - strand at 875.495 kb on + strand at 875.572 kb on - strand at 875.590 kb on + strand at 875.590 kb on + strand at 875.590 kb on + strand at 875.590 kb on + strand at 875.591 kb on - strand at 875.591 kb on - strand at 875.651 kb on + strand at 875.652 kb on - strand at 875.652 kb on - strand at 875.652 kb on - strand at 875.690 kb on + strand at 875.690 kb on + strand at 875.690 kb on + strand at 875.690 kb on + strand at 875.691 kb on - strand at 875.691 kb on - strand at 875.691 kb on - strand at 875.691 kb on - strand at 875.691 kb on - strand at 875.737 kb on - strand, within Psyr_0771 at 875.789 kb on + strand, within Psyr_0771 at 875.790 kb on - strand, within Psyr_0771
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Methanol 5 vol% remove 873,439 + Psyr_0767 0.51 -0.3 873,446 - Psyr_0767 0.51 +0.1 873,753 + Psyr_0767 0.85 -0.0 873,754 - Psyr_0767 0.85 -0.9 873,779 + Psyr_0767 0.88 +0.7 873,779 + Psyr_0767 0.88 +0.3 873,779 + Psyr_0767 0.88 +1.0 873,779 + Psyr_0767 0.88 +1.5 873,780 - Psyr_0767 0.88 -0.3 873,780 - Psyr_0767 0.88 +0.5 873,780 - Psyr_0767 0.88 +0.3 873,780 - Psyr_0767 0.88 +1.6 873,780 - Psyr_0767 0.88 +0.7 873,780 - Psyr_0767 0.88 +0.4 873,780 - Psyr_0767 0.88 -0.6 873,780 - Psyr_0767 0.88 -0.1 873,780 - Psyr_0767 0.88 -1.8 874,075 + -0.2 874,076 - -0.9 874,076 - +1.0 874,076 - -0.2 874,076 - +0.5 874,076 - +2.1 874,165 + Psyr_0768 0.67 -0.9 874,214 + -1.2 874,214 + +0.1 874,215 - -0.9 874,431 - +0.7 874,440 - -0.0 874,440 - +0.5 874,440 - -0.7 874,658 + Psyr_0769 0.54 -0.5 874,658 + Psyr_0769 0.54 -0.9 874,658 + Psyr_0769 0.54 +1.0 874,659 - Psyr_0769 0.54 -0.5 874,659 - Psyr_0769 0.54 -1.8 874,772 - Psyr_0769 0.80 -0.5 874,772 - Psyr_0769 0.80 -1.0 874,830 + -1.0 874,830 + -1.2 874,831 - -1.5 874,861 + +0.1 874,861 + +0.5 874,861 + -0.5 874,861 + -0.3 874,861 + +0.4 874,862 - -0.3 874,862 - +2.0 874,862 - +1.5 874,884 - +1.5 874,884 - -1.1 874,887 + -0.6 874,887 + -0.8 874,887 + +0.1 874,887 + -0.8 874,888 - -1.1 874,888 - -0.7 874,888 - +0.1 874,923 + Psyr_0770 0.10 +1.4 874,923 + Psyr_0770 0.10 -0.0 874,923 + Psyr_0770 0.10 -0.2 874,923 + Psyr_0770 0.10 -0.6 874,923 + Psyr_0770 0.10 -0.4 874,924 - Psyr_0770 0.10 +1.5 874,924 - Psyr_0770 0.10 +0.3 874,924 - Psyr_0770 0.10 -0.3 874,924 - Psyr_0770 0.10 -3.7 874,973 + Psyr_0770 0.21 +0.6 874,973 + Psyr_0770 0.21 +0.6 874,973 + Psyr_0770 0.21 -0.7 874,974 - Psyr_0770 0.21 +0.4 874,984 + Psyr_0770 0.24 -0.5 875,075 - Psyr_0770 0.43 +1.5 875,183 + Psyr_0770 0.67 +1.0 875,183 + Psyr_0770 0.67 -0.1 875,184 - Psyr_0770 0.67 -1.0 875,184 - Psyr_0770 0.67 -0.3 875,269 + Psyr_0770 0.86 -0.8 875,269 + Psyr_0770 0.86 -0.1 875,275 + Psyr_0770 0.87 -0.4 875,275 + Psyr_0770 0.87 -1.0 875,275 + Psyr_0770 0.87 -0.1 875,276 - Psyr_0770 0.87 +1.6 875,276 - Psyr_0770 0.87 -1.2 875,276 - Psyr_0770 0.87 -1.8 875,334 + -1.1 875,335 - +0.4 875,433 - +0.8 875,433 - -1.0 875,441 + +0.4 875,441 + +0.6 875,442 - -0.5 875,442 - +0.6 875,442 - +1.5 875,442 - +0.3 875,442 - -1.1 875,442 - +0.2 875,444 + +0.2 875,445 - +0.6 875,478 + +2.4 875,478 + +0.1 875,478 + -0.4 875,479 - -1.2 875,479 - -0.5 875,495 + -0.6 875,572 - +1.3 875,590 + +0.6 875,590 + -0.2 875,590 + -0.3 875,590 + -0.8 875,591 - +0.8 875,591 - -0.3 875,651 + +0.8 875,652 - +0.6 875,652 - +0.4 875,652 - -1.2 875,690 + -0.6 875,690 + +0.5 875,690 + -1.4 875,690 + -0.7 875,691 - -1.5 875,691 - -0.5 875,691 - +1.1 875,691 - +0.0 875,691 - +1.9 875,737 - Psyr_0771 0.12 +0.7 875,789 + Psyr_0771 0.17 +2.3 875,790 - Psyr_0771 0.17 -0.2
Or see this region's nucleotide sequence